TTTTAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCTACGATGGACAGGGACCCACAGTCTTTTAAGGCGTTT
CATTCTCTGTCTAGCCCCACGTCCCCAAACTCAAGTCGTTTCCCAGTACT
GGGGTACCTTAAAGGATCCACTAACAGTAGAAGGGAACATGTCTGGGTGG
ACTCTGTCGTTTTTCCCAAAGGTTCCCGTGCAGATAATTCCTTCCAAGGA
CCCTAGAATGTTACAGCCAGTCTCTTCCAGTGCGGGCAACCTGGGCTTCT
TCTCAGTGACGAACCTACTCCCTGAGGCAAGCAGAGGTTGGGAGGCCTAG
CTACTTGTTGGAAAAGGACAAAGCATAAAACACAGCCACATCACTAAACA
AACAAACAAACAAAATAAGCACTCTACCTGCCTGGTATCTCTCTGAACGA
CAGCTTCTTTACACTTTTACTGAATAAGTCTGGTGCTTGGGTCAGAAGGC
ATTAGTAATAAAAAAGTGTAACTAGGAAATGCATGTATGTTGAAGAACTA
CTTTACAAATTAAATACTGCCTGAGCTATTCACTTTACGGCTAGACAGAT
GACTGGCTGATTGATTGATATCCCATAGAGGTAACTATTAGGTAGGGGCA
TCTTGCTCATCAAGTTGTTCTCTAAACTGTGAATGCATTCATTCAGTGAC
AGGACATACTGATATGCCCTCAAGAGGCTCAACATCCATTGTCTCN

NNNCCACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAAAATGGC
TAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGATTGCAACTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCTGAG
GATCCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGG
TAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACTCAGATGCCCCTCAACAGAGGAATGGACACAA
AAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACCCAATCACAAAGGAATTCACACAATATGTACTCACT
GATAAGTGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGGTAC
AATATGTAAAACATATGANACTGAAGAAGAACGAAGACCN

Query= MSMg01no522_d13.b1 MSMg01no522_d13.b1 CHROMAT_FILE:
MSMg01no522_d13.b1 PHD_FILE: MSMg01no522_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:46 2005
         (691 letters)



>mm_chr2_77634489_77635580
          Length = 1092

 Score = 1255 bits (649), Expect = 0.0
 Identities = 679/689 (98%), Gaps = 1/689 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctacgatggacagggacccacagtcttttaaggcgtttcattctctgtctag 63
           |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 ggaattctctacgaaggacagggacccacagtcttctaaggcgtttcattctctgtctag 263

                                                                       
Query: 64  ccccacgtccccaaactcaagtcgtttcccagtactggggtaccttaaaggatccactaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccccacgtccccaaactcaagtcgtttcccagtactggggtaccttaaaggatccactaa 323

                                                                       
Query: 124 cagtagaagggaacatgtctgggtggactctgtcgtttttcccaaaggttcccgtgcaga 183
           |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 324 cagtagaagggaacatgtctggatggactctgtcgtttttcccaaaggttcctgtgcaga 383

                                                                       
Query: 184 taattccttccaaggaccctagaatgttacagccagtctcttccagtgcgggcaacctgg 243
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 taattccttccaaggaccctagaatgttacagccagcctcttccagtgcgggcaacctgg 443

                                                                       
Query: 244 gcttcttctcagtgacgaacctactccctgaggcaagcagaggttgggaggcctagctac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcttcttctcagtgacgaacctactccctgaggcaagcagaggttgggaggcctagctac 503

                                                                       
Query: 304 ttgttggaaaaggacaaagcataaaacacagccacatcactaaacaaacaaacaaacaaa 363
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgttgggaaaggacaaagcataaaacacagccacatcactaaacaaacaaacaaacaaa 563

                                                                       
Query: 364 ataagcactctacctgcctggtatctctctgaacgacagcttctttacacttttactgaa 423
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 ataagcactctacctgcctggtatctctctgaacgacagcttcttcacacttttactgaa 623

                                                                       
Query: 424 taagtctggtgcttgggtcagaaggcattagtaataa-aaaagtgtaactaggaaatgca 482
           |||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 624 taagtctggtgcttggatcagaaggcactagtaataataaaagtgtaactaggaaatgca 683

                                                                       
Query: 483 tgtatgttgaagaactactttacaaattaaatactgcctgagctattcactttacggcta 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtatgttgaagaactactttacaaattaaatactgcctgagctattcactttacggcta 743

                                                                       
Query: 543 gacagatgactggctgattgattgatatcccatagaggtaactattaggtaggggcatct 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gacagatgactggctgattgattgatatcccatagaggtaactattaggtaggggcatct 803

                                                                       
Query: 603 tgctcatcaagttgttctctaaactgtgaatgcattcattcagtgacaggacatactgat 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgctcatcaagttgttctctaaactgtgaatgcattcattcagtgacaggacatactgat 863

                                        
Query: 663 atgccctcaagaggctcaacatccattgt 691
           |||||||||||||||||||||||||||||
Sbjct: 864 atgccctcaagaggctcaacatccattgt 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1092
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1082
Effective search space:   736842
Effective search space used:   736842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)