GAAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTCTTACTATTTAAGAAAAATACCATAGTCAAGAAAAGAT
TTCTTGCTGCCCTGAAGCTGCTGCCTCCCTCATGGGCCTGAGAGAAGCAT
AGAAATGGGTGCTAGGACTTCAGAAGCGCTTGGTGATTGTGGGACAGGAA
GAAAACATCCATTTTAGAAATCTCAGACTGGTCCTTTAGGATCTCTGGCA
GTTCCCCAGCCAGCAAGAGTGTAGCTTAACCTGGCTACCCAAAGACCATG
GGAGGCTAGAGAAGGAGACTCCGAAGACTTGACCGTGTAGGACCAAGCTC
CCAATGGCTTTTTCCCCCTAGGAACAGGCTGGTGGCATACTGACTGGGCT
CAACATGGGTATGTCTGTCCTTCCTCAGCTTACTGATATCCATCACGGTC
CCTTCCTTTTGTGGCTTAATTAAGGATGCCATGTTTGAATAAGTGAAGTT
AATGATGGGATTGGGTGGATGTCATTGAAGGACTGAGCGATAGACAAGCT
TGTCCTTAGAGATGCTACCTCAGTGCTGGGACTGATGTCAGTCTCACCCA
TGGGAGGGGGGTGGTCCCTTAGCAGCTGTCCCTAACCAAAGCACATGTCA
GGGCTTTTGAGTTTCCATGAGGGGAGCACCTCCCTCAGGNATGGAGTTGG
CAAGGGTGAACGGTGAAGCTACAGGCTCCTCTGCTCCCAGCTCATCCCTG
TTTGGCAAG

NNNAATTACCCCCNAAANNNNNAANNCCCNNNCNCCCNCCCGNTTTTCCC
NACTTTANNNNACACNANANAANGATCCCCGNNAANTCTTTANANNACTT
TNAATATTANNNCCCTCTATTGNNTGNGNNNNTAANNNAAAAACTTTTTT
CCCCACAACCCAAAAANNNNTGNTTNCCCAATTTNNCCCTGNTNNACNAT
NNNCCTTTTNNAAANTTTCCCANNTTTTANNAANNTCCCCANTAACCANN
NCCTTAAACCTTAAAACCCCNAACCCCCNNNAAANNCCCNTTTAATTTCG
NNNNTGATTTTATTTTCTTATATTTTNCCAAANCCNNNNNNNTTCATATG
NNNNTATATTGTGATAGATTTATTTTTATGGNNNNNNCTGNNCNNNNNNG
NNGNNNNNCCNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTG
GGTGGGCGGGGGGTGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNGNNN
NAGTGTTGGTGGTTGGGGGGGTGGGGGGGGGGGGGGGTGAGGGGTGCGAA
GAAGTNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTNTTTTTG

Query= MSMg01no522_l01.b1 MSMg01no522_l01.b1 CHROMAT_FILE:
MSMg01no522_l01.b1 PHD_FILE: MSMg01no522_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:21 2005
         (608 letters)



>mm_chr2_177907081_177908088
          Length = 1008

 Score = 1160 bits (600), Expect = 0.0
 Identities = 603/604 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcttactatttaagaaaaataccatagtcaagaaaagatttcttgctgccct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcttactatttaagaaaaataccatagtcaagaaaagatttcttgctgccct 264

                                                                       
Query: 65  gaagctgctgcctccctcatgggcctgagagaagcatagaaatgggtgctaggacttcag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagctgctgcctccctcatgggcctgagagaagcatagaaatgggtgctaggacttcag 324

                                                                       
Query: 125 aagcgcttggtgattgtgggacaggaagaaaacatccattttagaaatctcagactggtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagcgcttggtgattgtgggacaggaagaaaacatccattttagaaatctcagactggtc 384

                                                                       
Query: 185 ctttaggatctctggcagttccccagccagcaagagtgtagcttaacctggctacccaaa 244
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 ctttaggatctctggcagttccccagccagcaagagggtagcttaacctggctacccaaa 444

                                                                       
Query: 245 gaccatgggaggctagagaaggagactccgaagacttgaccgtgtaggaccaagctccca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaccatgggaggctagagaaggagactccgaagacttgaccgtgtaggaccaagctccca 504

                                                                       
Query: 305 atggctttttccccctaggaacaggctggtggcatactgactgggctcaacatgggtatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggctttttccccctaggaacaggctggtggcatactgactgggctcaacatgggtatg 564

                                                                       
Query: 365 tctgtccttcctcagcttactgatatccatcacggtcccttccttttgtggcttaattaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgtccttcctcagcttactgatatccatcacggtcccttccttttgtggcttaattaa 624

                                                                       
Query: 425 ggatgccatgtttgaataagtgaagttaatgatgggattgggtggatgtcattgaaggac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggatgccatgtttgaataagtgaagttaatgatgggattgggtggatgtcattgaaggac 684

                                                                       
Query: 485 tgagcgatagacaagcttgtccttagagatgctacctcagtgctgggactgatgtcagtc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgagcgatagacaagcttgtccttagagatgctacctcagtgctgggactgatgtcagtc 744

                                                                       
Query: 545 tcacccatgggaggggggtggtcccttagcagctgtccctaaccaaagcacatgtcaggg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcacccatgggaggggggtggtcccttagcagctgtccctaaccaaagcacatgtcaggg 804

               
Query: 605 cttt 608
           ||||
Sbjct: 805 cttt 808


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)