NNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTCCAGATGTTCTAAGAAAGATAATTTTATTCTAAAATTATA
AAGTGATGATCAATTGTTAAAAGAGGATAGCTGAGTCTTCAAAAAAGACT
CTTGTCCAAATTCTGAAATTTTAATGTCAAAAACTTCACTGGAGGAATGT
TCAGGGTTACACAGAAGTCGATGTTCTCCATGCACAGCATAGGTCAGGAA
CCAGGACCTATGGTTCACACCTCTGGCATAAAGATCTCAAGTTCTGTATG
TTGACATAAGTCTCCTGATGTGGCCTAGAATTAAAGGCAAATTTACATTA
ATTGTATCATTGAATTATATTTTGTATCAGTAAAAAATGTTTCCATGTCA
TTAGATGAGATAAAATTTTCTGTTTATGTACAGTCCAGGTACATAGGGGG
AGGGTCCAGTGCTTTCAAGCTCCCACATACAGCACCGCCCATCTACCTAA
ACTCTGATTTGAAAGGACCACTAACTTCTGGGGTGAGAGAAACAGCCTAT
CTTTTCCTTCCCATCCCATTTCATACCCTCACCATTCACAGAGCCACTCT
TGACTTGGACAGAGCTTGCCCTTATCATGGTTTAAATTAACAAGAGTTTG
CAAATTAGCATTAAAGTCTCAGACTTTTGCAGACTTTACGTATAAGAATG
TTTCTAAAGCACATTACCAGTTTAGACCAGCTATTATGTTGATAGTATTC
CCTCTA

NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAACATGTAGGAA
GGAGTCAGAGAGCTCAAAGACACCAGAAAAACAAAACAAAACAAACAAAA
GCAAACCACACACACAAAACAAAAACAAAACAAACAACACAACACAGAAT
CAACCAACCTGGGCTCCTAGTAGCTCATAGAAACTGAAATGATCAAAGAG
CCTGCACGGGTCTGACCTAGACCCTCTGCATATATGTTATGGTTTTGTGT
AGCTGGTCTACTTGTGGGTCTCCTTACAGTGGGAAAAGTTGCCGTTCCTG
ACTCTTTTGCCTGATTTTGGATTCCTTTTCCTTCTCATAAGTTGCCTCAT
CCAGCCTTAATGAAAGAGAAGATGCCTAGTGTTCTTGCAACTTAAAATGC
CATGCTTGGTTGATATCCCTGGGGTACCCACCAATTTCTGTAGGGAAAGA
TGGAGGATTGGATGGGAGTGGTCAAGATATGGGCAGGGACTGGGAGGGGA
GTAAGAGGGGAAACTATGGTTGGGATATAATATATGAAGGAAAATTAAAT
TAATAAAAATCAACTACGTGATTGTAACAGAAATTTTGCAATTTTCAAAG
GTAAACAGAAGAAAAGAAAATTTGAAGACTTCCACATCCATTTAGGCGCT
TCTGCTCTTGCAAGTTCTCCCTTTCCCTTTTTTAAAAACCTGACTTGGTG
TT

Query= MSMg01no522_m12.b1 MSMg01no522_m12.b1 CHROMAT_FILE:
MSMg01no522_m12.b1 PHD_FILE: MSMg01no522_m12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:28 2005
         (600 letters)



>mm_chr2_40453614_40454614
          Length = 1001

 Score = 1110 bits (574), Expect = 0.0
 Identities = 592/598 (98%), Gaps = 1/598 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttccagatgttctaagaaagataattttattctaaaattataaagtgatgatc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggaattcttccagatgttctaagaaagataattttattctaaaattataaagtgatgatc 742

                                                                       
Query: 64  aattgttaaaagaggatagctgagtcttcaaaaaagactcttgtccaaattctgaaattt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aattgttaaaagaggatagctgagtcttcaaaaaagactcttgtccaaattctgaaattt 682

                                                                       
Query: 124 taatgtcaaaaacttcactggaggaatgttcagggttacacagaagtcgatgttctccat 183
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatggcaaaaacttcactggaggaatgttcagggttacacagaagtcgatgttctccat 622

                                                                       
Query: 184 gcacagcataggtcaggaaccaggacctatg-gttcacacctctggcataaagatctcaa 242
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 gcacagcataggtcaggaaccaggacctatgagttcacacctctggcataaagatctcaa 562

                                                                       
Query: 243 gttctgtatgttgacataagtctcctgatgtggcctagaattaaaggcaaatttacatta 302
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttctgtatgttgacataagtctcctgatgtggcctagaattaaaggcaaatttacatta 502

                                                                       
Query: 303 attgtatcattgaattatattttgtatcagtaaaaaatgtttccatgtcattagatgaga 362
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 attgtatcattgaattatattttgtatcagtaaagaatgtttccatgtcattagatgaga 442

                                                                       
Query: 363 taaaattttctgtttatgtacagtccaggtacatagggggagggtccagtgctttcaagc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaattttctgtttatgtacagtccaggtacatagggggagggtccagtgctttcaagc 382

                                                                       
Query: 423 tcccacatacagcaccgcccatctacctaaactctgatttgaaaggaccactaacttctg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccacatacagcaccgcccatctacctaaactctgatttgaaaggaccactaacttctg 322

                                                                       
Query: 483 gggtgagagaaacagcctatcttttccttcccatcccatttcataccctcaccattcaca 542
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gggtgagagaaacagcctatcttttcctttccatcccatttcataccctcaccattcaca 262

                                                                     
Query: 543 gagccactcttgacttggacagagcttgcccttatcatggtttaaattaacaagagtt 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gagccactcttgacttggacagagcttgcccttatcatggtttaaattaacatgagtt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space:   584690
Effective search space used:   584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)