Query= MSMg01no525_i06.b1 MSMg01no525_i06.b1 CHROMAT_FILE:
MSMg01no525_i06.b1 PHD_FILE: MSMg01no525_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:10 2005
(656 letters)
>mm_chr2_122136834_122137889
Length = 1056
Score = 1145 bits (592), Expect = 0.0
Identities = 634/652 (97%), Gaps = 8/652 (1%)
Strand = Plus / Plus
Query: 5 gaattccaacattgtctatttgcagcataagcagatattaactaacttaaggcatcttgg 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaacaatggatatttgcagcataagcagatattaactaacttaaggcatcttgg 264
Query: 65 tcaggatcacgtattcttagtattcctgtgcttattttaatgagaggttataaaagtttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaggatcacgtattcttagtattcctgtgcttattttaatgagaggttataaaagtttt 324
Query: 125 gtgagcatggctcatctctattaacatgatgcgtcaaagaaacactaacaaaaggctttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgagcatggctcatctctattaacatgatgcgtcaaagaaacactaacaaaaggctttt 384
Query: 185 ctgtatctcaagtacagaacggacattgttaacttatttgcaattctcccaaatattaag 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgtatctcaagtacagaatggacattgttaacttatttgcaattctcccaaatattaag 444
Query: 245 gatgattagagcaagtgatggttgctgaatccgatttgccttgcttggtcccttgctctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgattagagcaagtgatggttgctgaatccgatttgccttgcttggtcccttgctctc 504
Query: 305 ttgctctcttccactctcccatttcacttttcactacttagctattctttactctatgct 364
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 505 ttgctctcttccactctcccatttcacttttcactacttagctattccttactctatgct 564
Query: 365 gcctggcttggtaaagctgaatttccgggctgatcctaatttggtttcattattatgcta 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 gcctggcttggtaaagctgaatttctgggctgatcctaatttggtttcattattatgcta 624
Query: 425 acagggcttcagcgagaagagatcggagctctgctttgccaacaaagcctgtgtttctct 484
||||||||||| | || ||| ||||||||||||||||||||||||| |||||||
Sbjct: 625 acagggcttcatc---aacaga-----gctctgctttgccaacaaagcctgtatttctct 676
Query: 485 tgggaccgtcttcctctctcaggcttgacaagtgaagcctaactgtagaattggttcaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgggaccgtcttcctctctcaggcttgacaagtgaagcctaactgtagaattggttcaaa 736
Query: 545 tagcacaatctcacatcaatattaattttatcccttggtcccttagctctccaccatgac 604
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 737 tagcacaatctcacatcaatattaattttatcccttggtcccttagctcaccaccatgac 796
Query: 605 tgggatacacatgcattttatactgatgaacataagcagccattggacaatc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tgggatacacatgcattttatactgatgaacataagcagccattggacaatc 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_i06.g1 MSMg01no525_i06.g1 CHROMAT_FILE:
MSMg01no525_i06.g1 PHD_FILE: MSMg01no525_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:10 2005
(290 letters)
>mm_chr2_122227201_122227890
Length = 690
Score = 458 bits (237), Expect = e-133
Identities = 281/303 (92%), Gaps = 14/303 (4%)
Strand = Plus / Plus
Query: 1 tcctgggatctaccatgcccagcaggtataagtccaggttttgcaaaatcaggagtatgt 60
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tcctgagatctaccatgcccagcaggtataagtttaggttttgcaaaatcaggagtatgt 260
Query: 61 atgggaggtgagggtgggagagatggatacctgttgtctttactaagtgagttgtgtgac 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgggaggtcagggtgggagagatggatacctgttgtctttactaagtgagttgtgtgac 320
Query: 121 ga-ttttactgtgggcctgagtgtgtggcatccctgtgatgctaccaggcatctgcatct 179
| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 321 -agttttactgtgggcctgagtgtgtgacatccctctgatgctaccaggcatctgcatct 379
Query: 180 tgatgacgtgtgttatcccagccagtgtgattggtatcttcaaga------------ctc 227
||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 380 tgatgacgtgtgttatcccagacagtgtgattggtatcttcaagaagatcttcaagactc 439
Query: 228 attttattggaagactctgttccacacccattgataatagtcaatcccgctggtgctgat 287
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 440 attttattggaagactctgttccacacccattgataatagtcaatctcgctggtgctgat 499
Query: 288 gta 290
|||
Sbjct: 500 gta 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
