Query= MSMg01no526_c05.b1 MSMg01no526_c05.b1 CHROMAT_FILE:
MSMg01no526_c05.b1 PHD_FILE: MSMg01no526_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:58 2005
(448 letters)
>mm_chr2_84206209_84207053
Length = 845
Score = 814 bits (421), Expect = 0.0
Identities = 438/445 (98%), Gaps = 4/445 (0%)
Strand = Plus / Minus
Query: 5 gaattcatagcatccagctcttccaaacctaagatagatttcttacaaactaacccatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaattcatagcatccagctcttccaaacctaagatagatttcttacaaactaacccatct 392
Query: 65 tcaccggtgatgtcaccagaagctcagttgcattcatcagaaatttagcaataatttgag 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcaccggtgatatcaccagaagctcagttgcattcatcagaaatttagcaataatttgag 332
Query: 125 aaatttccattctccctttcatttctccttataggccttttcatatcctcactaaatcca 184
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 a---gtccattctccctttcatttctccttataggccttttcatatcctcactaaatcca 275
Query: 185 gttttaatcatctctgacaccattactactaaatatgtcctatgtaactttaaaaattat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gttttaatcatctctgacaccattactactaaatatgtcctatgtaactttaaaaattat 215
Query: 245 tatttcttatcagggactcactgtttagaccttgctggcccgaaactgtatgtagacttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tatttcttatcagggactcactgtttagaccttgctggcccgaaactgtatgtagacttg 155
Query: 305 gctagtttcagactcatggagatctgtcttccaaatgttgggattgaaggtgtgttctac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 154 gctagtttcagactcatggagatctgtcttccaaatgttgggattgaaggtgtgttccac 95
Query: 365 cacacccagctgctattctaatggcttttaaaaatcagtttactttattcaactgtagac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 cacacccagctgctattctaatggcttttaaaaatcagtttactttattcaactgtagac 35
Query: 425 aatcttt-aaaaaaaaaactgcatc 448
||||||| |||||||||||||||||
Sbjct: 34 aatctttaaaaaaaaaaactgcatc 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 845
Length adjustment: 10
Effective length of query: 438
Effective length of database: 835
Effective search space: 365730
Effective search space used: 365730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c05.g1 MSMg01no526_c05.g1 CHROMAT_FILE:
MSMg01no526_c05.g1 PHD_FILE: MSMg01no526_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:58 2005
(178 letters)
>mm_chr2_84029172_84029749
Length = 578
Score = 306 bits (158), Expect = 7e-88
Identities = 173/178 (97%)
Strand = Plus / Plus
Query: 1 ttagcatctcacggatgcagagtctattaagtgggtaccaatgaggttgaagtaatcact 60
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 201 ttagcatcttacggatgcagagtctactaagtgggtaccaatgaggttgaagtaatctct 260
Query: 61 gtaattgggcacgaaaatagatggtcagaagaaatggagttctctgtttagacaggtgta 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaattgggcatgaaaatagatggtcagaagaaatggagttctctgtttagacaggtgta 320
Query: 121 gctcttgaataatttgtattcagtttgactttgttttctatagaaatctcaagtacat 178
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcttgaataatttgtactcagtttgactttgttttctatagaaatctcaagtacat 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
