Query= MSMg01no526_i08.b1 MSMg01no526_i08.b1 CHROMAT_FILE:
MSMg01no526_i08.b1 PHD_FILE: MSMg01no526_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:28 2005
(648 letters)
>mm_chr2_82667311_82668358
Length = 1048
Score = 1203 bits (622), Expect = 0.0
Identities = 639/648 (98%), Gaps = 6/648 (0%)
Strand = Plus / Minus
Query: 7 gaattcaagaagaaatggaagcctttgtgcactgtgcagctctttccaaaagtaaccgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gaattcaagaagaaatggaagcctttgtgcactgtgcagctctttccaaaagtaaccgtg 935
Query: 67 aagtatatga------aacatcctttttccatgcatacccatggtaagctcacccatgtt 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 aagtatatgaaacagtaacatcctttttccatgcatacccatggtaagctcacccatgtt 875
Query: 121 taatatatacagcaacattacttagaaacaaatatagaaaaaatccaaatgtttattaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 taatatatacagcaacattacttagaaacaaatatagaaaaaatccaaatgtttattaaa 815
Query: 181 tgctaaagggataaaagccatgcctggatttttggaacagcatttgactgtcagaaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tgctaaagggataaaagccatgcctggatttttggaacagcatttgactgtcagaaaaaa 755
Query: 241 ggatttggtggtctgggtataatagagacaaacctggaaacattgagctaagagacaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ggatttggtggtctgggtataatagagacaaacctggaaacattgagctaagagacaaaa 695
Query: 301 agccactctcaaaaggctgaatgttgagggtaagtttgtcgaaaaaggaaataagttgtg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cgccactctcaaaaggctgaatgttgagggtaagtttgtcgaaaaaggaaataagttgtg 635
Query: 361 agtttcttaaggcttaaatttggagaaggaagaaatggagcaacattgctaatttgcgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agtttcttaaggcttaaatttggagaaggaagaaatggagcaacattgctaatttgcgga 575
Query: 421 aaagtttctgaaatgagacagaatgtacgtgtaagagtatactaaaatggggctggagac 480
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 574 aaaggttctgaaatgagacagaatgtatgtgtaagagtatactaaaatggggctggagac 515
Query: 481 ctggctcaatagttgtcggcacatgctactctgttatttcagagaaacaagcacagctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctggctcaatagttgtcggcacatgctactctgttatttcagagaaacaagcacagctcc 455
Query: 541 cagtaactacatgggaaactcagaacaccctggagaggtaggggatttgagcctgttctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagtaactacatgggaaactcagaacaccctggagaggtaggggatttgagcctgttctc 395
Query: 601 tgcactctgtaatcacctgcacttgtgcgacatcaacaaatatacact 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgcactctgtaatcacctgcacttgtgcgacatcaacaaatatacact 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_i08.g1 MSMg01no526_i08.g1 CHROMAT_FILE:
MSMg01no526_i08.g1 PHD_FILE: MSMg01no526_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:28 2005
(573 letters)
>mm_chr2_82491842_82492814
Length = 973
Score = 1069 bits (553), Expect = 0.0
Identities = 568/573 (99%)
Strand = Plus / Plus
Query: 1 aggaaggcatactccagagaaccaaataaccctattaaaaagtggccctcagaactaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaaggcatactccagagaaccaaataaccctattaaaaagtggccctcagaactaaat 260
Query: 61 agacaattctcaactgaggaaaatctaatatattgcaagtcttttaaaatcagcaatgtt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacaattctcaactgaggaaagtctaatatattgcaagtcttttaaaatcagcaatgtt 320
Query: 121 tggcgctattctttcgaaatttatattttattttctcaaattgagtctgcaattgaagtt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccgctattctttcgaaatttatattttattttctcaaattgagtctgcaattgaagtt 380
Query: 181 acatgacataacaattttactatgcatttttaatagtctagcagtgtgaaatattcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgacataacaattttactatgcatttttaatagtctagcagtgtgaaatattcagaa 440
Query: 241 ttttacaaaaccaggaatcatactcaaagttctttaaaaaaaatattgtacatcagatat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttacaaaacctggaatcatactcaaagttctttaaaaaaaatattgtacatcagatat 500
Query: 301 gatggtgaggagacaggagagaagcccagatggtcaggagaatgaatagaaatatgcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatggtgaggagacaggagagaagcccagatggtcaggagaatgaatagaaatatgcaac 560
Query: 361 agtgttgggttgatgtggggaaccctttagaaagtcccggacaccatggataggatatgc 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 agtgttgggttgatgtggggaaccctttagaaagtcccagacaccatggataggatatgc 620
Query: 421 ttcccggacccaatggggttaatcttagtcaaagtgcccaacagtaaatggccctcattt 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcccagacccaatggggttaatcttagtcaaagtgcccaacagtaaatggccctcattt 680
Query: 481 aaggcatggtgccacccacccatcttcaaaatttttgactgacaattttcctgtccaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaggcatggtgccacccacccatcttcaaaatttttgactgacaattttcctgtccaaag 740
Query: 541 gaaatttacagacaaaaattgagcaagactgaa 573
|||||||||||||||||||||||||||||||||
Sbjct: 741 gaaatttacagacaaaaattgagcaagactgaa 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
