This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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Search Result
BAC
Clone Name
MSMg01-526P14
Chromosome
2 (Build37)
Map Location
42,052,072 - 42,250,207
singlet/doublet
doublet
Overlap gene
Lrp1b
Upstream gene
LOC100042629
,
LOC625094
Downstream gene
LOC100041228
Link
Open Mouse BAC browser
Click to get alignment info.
name
Lrp1b
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:94217
MGI:2151136
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100042629
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042629
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs
name
LOC625094
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:625094
definition
note
: RAN, member RAS oncogene family, pseudogene
pseudo
: _no_value
name
LOC100041228
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041228
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs
name
Lrp1b
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:16519538
GeneID:94217
MGI:2151136
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: low density lipoprotein-related protein 1B (deleted in tumors)
transcript_id
: NM_053011.1
name
LOC100042629
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149249306
GeneID:100042629
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs
product
: hypothetical protein LOC100042629
transcript_id
: XM_001479594.1
name
LOC100041228
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149249269
GeneID:100041228
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs
product
: similar to TTF-I interacting peptide 20; TIP20; Transcription Termination Factor I Interacting Peptide 20
transcript_id
: XM_001476004.1
name
Lrp1b
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:16519539
GeneID:94217
MGI:2151136
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]
GO_function
: GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005041 - low-density lipoprotein receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]
GO_process
: GO:0006897 - endocytosis [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: low density lipoprotein receptor related protein LRP1B/LRP-DIT
product
: low density lipoprotein-related protein 1B
protein_id
: NP_443737.1
name
LOC100042629
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149249307
GeneID:100042629
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001479644.1
name
LOC100041228
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149249270
GeneID:100041228
definition
codon_start
: 1
product
: similar to TTF-I interacting peptide 20; TIP20; Transcription Termination Factor I Interacting Peptide 20
protein_id
: XP_001476054.1
clone name
MSMg01-324K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-372I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-422L04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-440N12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-536O11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-482P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483M04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-265L13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-111H06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-290M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-319H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430M19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-095G01
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-139J21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276L15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486K13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052G18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-092O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-055G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-404C10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-151L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-353H04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-324I11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-318P20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-360E13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-157A11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-292N16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-322N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-188B02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-330E01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-506P23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-414B23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-469O17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-428M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-464F07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-533G17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-526P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-138E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-110P10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-276J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-332O01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-342L22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-311E02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-431O08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093C19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-459F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-277K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-084K08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-457J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106G24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-398A14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-402A11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-120I03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308G06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-534M22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-092O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-095G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108O03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-331E10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-378D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159P03
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-059F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390D17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-231C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-503L05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-506G04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-119K24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-179H15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-165A21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-402L09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-140O16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-115E03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236C12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-481B22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-390J21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-503M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-425O17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-195F01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-361C16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436K01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-411F17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-379N13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-525P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-070K24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-326B19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-117B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-036G06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-190H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-263M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182O06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-088K12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-201G01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-344M23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179B20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-272C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-221H19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142L24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-210J07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-298L14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-019B06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-231C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-080O11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255J03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-206N04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186G23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130M06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239A17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-059A12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-242L02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252G16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-298N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-300G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201C04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152F06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-287F06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-160A18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163E16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-105C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-072H19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061G16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332D07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-093I06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328F09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243N13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301C02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-210J03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021B18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309O21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-349B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-152N10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079I14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-031P03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-097F08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252F05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-170D19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240B11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-063M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-081P23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-273G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-108E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343F17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203F19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-238A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-123H23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-349H24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295G16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-235E08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-070G01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101O02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-060M11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-139L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-151D18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-101N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350B07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-018A13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-014D04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-031H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-267K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049C08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-047I17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160J07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-144I16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-123I14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-026M12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-285I16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-311N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-003G01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-068N07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104D09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-296G09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137C15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-092D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-296N15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058D11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-170K14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332I04
singlet/doublet
doublet
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unique
clone name
B6Ng01-259D20
singlet/doublet
singlet
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unique
clone name
B6Ng01-126M12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-220M12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272B15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-214M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-331D09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-041J08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-316C13
singlet/doublet
doublet
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unique
clone name
B6Ng01-165O18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-108H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130H05
singlet/doublet
doublet
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unique
clone name
B6Ng01-146L03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-309G21
singlet/doublet
singlet
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unique
clone name
B6Ng01-317A08
singlet/doublet
singlet
plural/unique
unique