GCATGTAGTATCTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCCTTTGACAGTGAGTATGATTAAATATTTTCACATG
CTGATGGTGCAGGTATGCATTCTTATCCCAGGTCTTATTTCATTGCACTG
AAGAAGAAACCTAATGGAAGTATGACCGGCAATGACGTTTAAATAAACAA
ACTTTAAATAAAAAATATAAGCAGTTAGATAAGGGTTACAAACTAGAATC
TGTATAAAGCCTTACGTTAAGGCTTAGTGAAATGGGGTGACCACTGGGCA
CTGCTTTTGGTCCTACTGACTTATAGTATTTACCAGGATTTGAGGGGTTA
GTGGTAGTAAGGTACATATTTCTAGGATTAATCATTGCAGCTGATATTAC
TTCATAGGACACATATCCCTACTTTAAAATTAGCAACCTGAGAGGTTGCT
CAGTGGTTGCGAACGCTACCTGCTTTTACACAGGACCCAACCAGAGTTTC
TAGCATCCACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT
TTATTTATTTATTTATTTGGTATTTTCTTCATTCACATTTCTAGTGGCTA
TCCCAAAAGTCCCCCCCCCCACTCCCCCACCCACCCACTCCACTTCCCGG
GCCCCGGCGTCCCCCTGCACTGAGGCATATAAAGTCTGCATGACCAGTGG
GTCTCTCTTTCCACTGATGGCCGACCAG

TCCAAATTNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAGCAGTAAGGAAG
AGAACTAGAACAAGAGATGAATAGAAATGAGGCCAGTCTCAGGGATGCTT
TTACCTTCCTGGCTCCAGTTTGTCTCCATGATGAGAAGCTGATACGAAGA
ACTATTCCCTTACTCTGTGGGGACCTTTGTTAAGCGTTTATGATTTCTAT
GTACGAAATGGTTTATTCACCCTCCCAAGAGTCCTCTCAACGTCTTGCTT
TCATTAGTGAGATTCCTAAGAATTTTAAACTCATATCAGCTTTTCCTAAT
GCTCACGGGGGAAGCAGACAGTGAACCACACCGTACTCCTGACTTTATCC
ATAGTTTTCATGTTTTGAAGATTTTAACAGGTTACACATCAGCCAAAGGA
AATAAGAAATGCCACTTCCACTTCCTTTTGTGCATATTGCTTCAGATCTT
TTGTTTGATAGCAGACGGGGAAGGAAAGACCATTCAGTTCTTGCAAATCC
CATCCTCTTTCCTTTTATGGATTGCTAGATAGTTCGAGGTAATATGAAGG
CCTCCTGGAGCGAGCTGTTTATGTTCTGATCTGAGAATGGAAACTTGCTC
GCTGTGGGACCTTGTTAGTGACCCCTCCCTCTGTCTGTGACACCTGGATG
ATGAACTATCAACGAGAATTACCTCA

Query= MSMg01no527_a12.b1 MSMg01no527_a12.b1 CHROMAT_FILE:
MSMg01no527_a12.b1 PHD_FILE: MSMg01no527_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:08 2005
         (542 letters)



>mm_chr2_115326636_115327577
          Length = 942

 Score =  938 bits (485), Expect = 0.0
 Identities = 517/537 (96%), Gaps = 16/537 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctttgacagtgagtatgattaaatattttcacatgctgatggtgcaggtatgca 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaattcctttgaaagtgagtatgattaaatattttcacatgctgatggtgcaggtatgca 525

                                                                       
Query: 65  ttcttatcccaggtcttatttcattgcactgaagaagaaacctaatggaagtatgaccgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 524 ttcttatcccaggtcttatttcattgcactgaagaagaaacctaatggacgtatgcccgg 465

                                                                       
Query: 125 caatgacgtttaaataaacaaactttaaataaaaaatataagcagttagataagggttac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caatgacgtttaaataaacaaactttaaataaaaaatataagcagttagataagggttac 405

                                                                       
Query: 185 aaactagaatctgtataaagccttacgttaaggcttagtgaaatggggtgaccactgggc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaactagaatctgtataaagccttacgttaaggcttagtgaaatggggtgaccactgggc 345

                                                                       
Query: 245 actgcttttggtcctactgacttatagtatttaccaggatttgaggggttagtggtagta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actgcttttggtcctactgacttatagtatttaccaggatttgaggggttagtggtagta 285

                                                                       
Query: 305 aggtacatatttctaggattaatcattgcagctgatattacttcataggacacatatccc 364
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aggtacatatttctaggatcaatcattgcagctgatattacttcataggacacatatccc 225

                                                                       
Query: 365 tactttaaaattagcaacctgagaggttgctcagtggttgcgaacgctacctgcttttac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tactttaaaattagcaacctgagaggttgctcagtggttgcgaacgctacctgcttttac 165

                                                                       
Query: 425 acaggacccaaccagagtttctagcatccacttatttatttatttatttatttatttatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 acaggacccaaccagagtttctagcatccacttatttatttatttatttatttatttatt 105

                                                                    
Query: 485 tatttatttatttatttatttatttatttggtattttcttcattcacatttctagtg 541
           ||||||||||             |||   ||||||||||||||||||||||||||||
Sbjct: 104 tatttattta-------------tta---ggtattttcttcattcacatttctagtg 64


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)