GGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTAACCTCTCCAAGAGGTAGATGATTTAGACTGCAGAGCTATC
CTCATTTTATGCATAATCAGAGCTTAATTTGCTCAAGGTCACTTGGCTTA
TAAATGACTGAGATGGGACTTTGCATCCAGGTCTGGTTCGGTTCCTATGT
GTCACTGAGGGCAACAGTTCAACTGTTGGTCAACCATAGATTGTCCTCNT
TGNNTTTTCCCCCATGGCCAAATTTGGAATTAACCAAAAGGAAAAAAGGG
GGGAAAAAAACCTTTTTTTCTCCCCCCTTTTTATTTTAAAAAGAAAGTTG
TTGGTCGCACGCCACACCAAAANAATANTTATTAAGTATCTATATTTCTC
GCCTTCCCCCCATACTTCTCCTTATTTTCTTATTTTTNATTTTTGGCNCT
CCTTNCCTCCTTTTTTTTTTTCTCCTCCTTCGGCTTTTCCCCTCCTTCTT
CCCCCTTTTTTTAATAACAATTTAATTTTTTATATTCATTGTCCCTTTCC
AATTTCCTACCTTTATCATTGTGGCTANATATTTTTTACTATTTACCTTA
ATTCATTTTCCTTATATTTTTACCCCTATCTTTCGCGTATTTTTTTTTTC
ACAACCCCCTTCATCAGTCTCCCTTCCATACATTTTCCATGTCTTTTCTT
TTTTTTTTTCTTCCCTTTTTCTCTTCCCCTCTTTTTTACACACACTTTCT
ATTATTTCGCTGAAAATATTATTTAACATAATTTATATACTTACCTCT

NAACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAACATCATACACTTGTGGA
AACTACTGGCAGCTGGCAAAATCACACCCCCCACAAAAGCATGAGAGCAG
CTCCGTATCCCATACCTGAGATCAAAACAAAACCATATTCATGTAACATT
TCTGTATTTAAAGAAACTAAAATTCTCACTACAAAACTGTCCTTGGCTAG
TCCTTGTGATTTACAGTATACTCAGGATCCGCTGCTTCTTGGTAAAGGTA
GGTTGGCTTCTGTATCCTGATCTGTCTGTCCTTTGCTATACCCTTGACCT
GTTACTTACAACTTCATGTAGTTCCTTACCTACACAAAGGGACAATTTGT
ACCTTTCTAAATGGGGTGTTGTATGTATGGTTTTTAGTATGTACATAGAG
TAAGCACCTGAAAATGGAAGCCATTTTCTGCTCACAATGTGTTACTGTTG
GTCAGTTCCACGAGTTATTTTTTTTTCTATTAGATGACTGATAACTAAGT
CCCACACAGAAACCTTTGTGATGTCCAGAGTTTTATAAATAGGAAGTGAA
GTCTGCATTCAAATGTCTTTGAGACATGAGAGGTACCACCTAAAACCCAG
GGAAACCCACATTTAACCTCACAGGCCTAAGCTCTTACTCCTTCTAATGT
ATATGGCTGTTTTGCCTGCATGTATATGTCTGCACTGGTTGGGTGCCTGG
TGCTTTGTGGAAAAAAGGTGACGGGTCTTTGA

Query= MSMg01no527_p24.g1 MSMg01no527_p24.g1 CHROMAT_FILE:
MSMg01no527_p24.g1 PHD_FILE: MSMg01no527_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:28 2005
         (545 letters)



>mm_chr2_35031977_35032921
          Length = 945

 Score = 1054 bits (545), Expect = 0.0
 Identities = 545/545 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaacatcatacacttgtggaaactactggcagctggcaaaatcacaccccccacaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 caaacatcatacacttgtggaaactactggcagctggcaaaatcacaccccccacaaaag 848

                                                                       
Query: 61  catgagagcagctccgtatcccatacctgagatcaaaacaaaaccatattcatgtaacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 catgagagcagctccgtatcccatacctgagatcaaaacaaaaccatattcatgtaacat 788

                                                                       
Query: 121 ttctgtatttaaagaaactaaaattctcactacaaaactgtccttggctagtccttgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttctgtatttaaagaaactaaaattctcactacaaaactgtccttggctagtccttgtga 728

                                                                       
Query: 181 tttacagtatactcaggatccgctgcttcttggtaaaggtaggttggcttctgtatcctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tttacagtatactcaggatccgctgcttcttggtaaaggtaggttggcttctgtatcctg 668

                                                                       
Query: 241 atctgtctgtcctttgctatacccttgacctgttacttacaacttcatgtagttccttac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atctgtctgtcctttgctatacccttgacctgttacttacaacttcatgtagttccttac 608

                                                                       
Query: 301 ctacacaaagggacaatttgtacctttctaaatggggtgttgtatgtatggtttttagta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctacacaaagggacaatttgtacctttctaaatggggtgttgtatgtatggtttttagta 548

                                                                       
Query: 361 tgtacatagagtaagcacctgaaaatggaagccattttctgctcacaatgtgttactgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgtacatagagtaagcacctgaaaatggaagccattttctgctcacaatgtgttactgtt 488

                                                                       
Query: 421 ggtcagttccacgagttatttttttttctattagatgactgataactaagtcccacacag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggtcagttccacgagttatttttttttctattagatgactgataactaagtcccacacag 428

                                                                       
Query: 481 aaacctttgtgatgtccagagttttataaataggaagtgaagtctgcattcaaatgtctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaacctttgtgatgtccagagttttataaataggaagtgaagtctgcattcaaatgtctt 368

                
Query: 541 tgaga 545
           |||||
Sbjct: 367 tgaga 363


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)