Query= MSMg01no528_i05.b1 MSMg01no528_i05.b1 CHROMAT_FILE:
MSMg01no528_i05.b1 PHD_FILE: MSMg01no528_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:08 2005
(684 letters)
>mm_chr2_37771061_37772144
Length = 1084
Score = 766 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Minus
Query: 285 agagaacattcttgactttagaaaagatatcaacatactgtaacacttgtcttgatgaca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 agagaacattcttgactttagaaaagatatcaacatactgtaacacttgtcttgatgaca 825
Query: 345 tgaaattgttctagtagaatcaatgtcagagaataatttgtgtataacatgaatttcatt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tgaaattgttctagtagaatcaatgtcagagaataatttgtgtataacatgaatttcatt 765
Query: 405 tgacttggtttattaggatatacaggatttcattcatgaaaatacacatcaccctggaat 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgacttggtttattaggatatacaggatttcattcatgaaaatacacatcaccctggaat 705
Query: 465 atctgcagttaactccattcagcatgtgtgcgttaggagataggtacatcgtctctacct 524
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 704 atctgcagttaactccattcagcatgtgtgcgtttggagataggtacatcgtctctacct 645
Query: 525 cctgttcctcaaggtttgtttatctaagggctgtgccacatcatgtgtatagaggactag 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cctgttcctcaaggtttgtttatctaagggctgtgccacatcatgtgtatagaggactag 585
Query: 585 aggactgaggagaacttatgcttatgacccagggttgaacgctgctagccaggcttgtgt 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aggactgaggagaacttatgcttatgacccagggttgaacgctgctagccaggcttgtgt 525
Query: 645 gcaagcccctctgcccacatgccatctcgccagcccagtg 684
||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcaagcccctctgcccacatgccatctcgccagcccagtg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_i05.g1 MSMg01no528_i05.g1 CHROMAT_FILE:
MSMg01no528_i05.g1 PHD_FILE: MSMg01no528_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:08 2005
(610 letters)
>mm_chr2_37622287_37623301
Length = 1015
Score = 1139 bits (589), Expect = 0.0
Identities = 607/615 (98%), Gaps = 5/615 (0%)
Strand = Plus / Plus
Query: 1 cattgttgtgaccagtgtagggtgggaactgatcccccctcagccccccccc--aagcca 58
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 cattgttgtgaccagtgtagggtgggaactgatcccccctcagccccccccccaaagcca 260
Query: 59 tgaaatccccatgcacccaccctgcgtctccccccttttctcttccactcttccttcctg 118
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tgaaatccccatgcacccaccctgcgtctccccctttttctcttccactcttccttcctg 320
Query: 119 gtctgcctgctgttccctcctccagccgtctgctcctgctgtcgctcctccggaaataac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgcctgctgttccctcctccagccgtctgctcctgctgtcgctcctccggaaataac 380
Query: 179 tgcattccttatttctcctggaagcttcaggcaccggctggctggctcccaaagaggact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcattccttatttctcctggaagcttcaggcaccggctggctggctcccaaagaggact 440
Query: 239 ctccaggggcagactttcaaagatcccctcctacttaacccctgctccagccacacaccc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccaggggcagactttcaaagatcccctcctacttaacccctgctccagccacacaccc 500
Query: 299 gtggaccccaactccttgcaaaggtcacatgagctgcatgcagctgcagcaagccagctg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggaccccaactccttgcaaaggtcacatgagctgcatgcagctgcagcaagccagctg 560
Query: 359 gctccctagatgactcttacca---tttttttttaagaagccgctgtatctggaggccaa 415
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 gctccctagatgactcttaccaatttttttttttaagaagccgctgtatctggaggccaa 620
Query: 416 gcccatgggctgtctctgctgtgtttctgctcacagtgccttggggcccggagagcaccc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccatgggctgtctctgctgtgtttctgctcacagtgccttggggcccggagagcaccc 680
Query: 476 ccaggggagacagtctttgttatgctgaagacatccggctgcctctccaggcacttagca 535
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 ccaggggagacagtctttgttatgctgaagacatccggcagcctctccaggcacttagca 740
Query: 536 tacactgcattcagttttgtgggcctgtttgtttaacgattggctcccttggttgtccca 595
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 741 tacactgcattcagttttgtgggcatgtttgtttaacgattggctcccttggttgtccca 800
Query: 596 acacaactctgcctc 610
|||||||||||||||
Sbjct: 801 acacaactctgcctc 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1015
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1005
Effective search space: 603000
Effective search space used: 603000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
