Query= MSMg01no529_g19.b1 MSMg01no529_g19.b1 CHROMAT_FILE:
MSMg01no529_g19.b1 PHD_FILE: MSMg01no529_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:23 2005
(722 letters)
>mm_chr2_75739193_75740314
Length = 1122
Score = 1191 bits (616), Expect = 0.0
Identities = 634/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtattgtgtgcaatacacctatcaacatatatccctcaatatattcagaaaaa 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaattcagtattgtgggaaatacacctatcaacatatatccctcaatatattcagaaaaa 581
Query: 65 acacttcattttatagattgtcaagtatttcctctaggaaaatcctaggatagagagagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acacttcattttatagattgtcaagtatttcctctaggaaaatcctaggatagagagagt 521
Query: 125 ctacacagatgaccctagtcatttaccacttcataatcagcacctgtgctagtcagggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctacacagatgaccctagtcatttaccacttcataatcagcacctgtgctagtcagggtt 461
Query: 185 tcgaacacagggaaggtgcaatcgtggaagaacctgggctgggaaactgactattcatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcgaacacagggaaggtgcaatcgtggaagaacctgggctgggaaactgactattcatta 401
Query: 245 taataggaaagcagatcttaatgaggactgaactattctgaactgaaagcattttgtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 taataggaaagcagatcttaatgaggactgaactattctgaactgaaagcattttgtgtt 341
Query: 305 tttgagaacaataaaaaaattacatatctttttataaatgttttcctcaaaacaatttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tttgagaacaataaaaaaattacatatctttttataaatgttttcctcaaaacaatttct 281
Query: 365 aactagaaaattagaaaatctatctcttaggaaagtcaaattttcagtatggcatccaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aactagaaaattagaaaatctatctcttaggaaagtcaaattttcagtatggcatccaac 221
Query: 425 atatctttttaggtaaaatcattaaaattactaaaagttaaactttaaaaaaattaat-a 483
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 220 atatctttttaggtaagatcattaaaattactaaaagttaaactttaaaaaaattaataa 161
Query: 484 aaaaaaaacttcagtcagaaaacttgagtctgttagagccaaaacagaaaaaaataaaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aaaaaaaacttcagtcagaaaacttgagtctgttagagccaaaacagaaaaaaataaaat 101
Query: 544 aaataaacatatgaaaaactagattctcaaaaggctggttttatagcagtgactgcaaca 603
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 100 aaataaacatatgaaaaactagattctcagaaggctggttttatagcagtaactgcaaca 41
Query: 604 gacatgaaataagtgtgagcaatgaggcctcttgtaaaca 643
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gacatgaaataagtgtgagcaatgaggcctcttgtaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 722
Length of database: 1122
Length adjustment: 10
Effective length of query: 712
Effective length of database: 1112
Effective search space: 791744
Effective search space used: 791744
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no529_g19.g1 MSMg01no529_g19.g1 CHROMAT_FILE:
MSMg01no529_g19.g1 PHD_FILE: MSMg01no529_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:23 2005
(644 letters)
>mm_chr2_75545727_75546770
Length = 1044
Score = 1210 bits (626), Expect = 0.0
Identities = 641/648 (98%), Gaps = 4/648 (0%)
Strand = Plus / Plus
Query: 1 aagttttattattattttctcagacccttacaacttacgtaaatctcgaaccttttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttttattattattttctcagacccttacaacttacgtaaatctcgaaccttttccat 260
Query: 61 ttaaccatttatcataagacacagtggttgattactgcgaggagtcattgcaatgcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaccatttatcataagacacagtggttgattactgcgaggagtcattgcaatgcaagt 320
Query: 121 tctttaaatagaggaattgtaaaggctactcggaaacctgttttgtgagcatgtcttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctttaaatagaggaattgtaaaggctactcggaaacctgttttgtgagcatgtcttttt 380
Query: 181 caaaccaggagacccaatagctctagaaaaggcaaggcacctgatttccatatatggaat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 caaaccaggagacccaatagctctagaaaaggcaaggcgcctgatttccatatatggaat 440
Query: 241 tcatgttccaggcatctgctgctaaacggataaagctacagttagccatcaacaccatca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatgttccaggcagctgctgctaaacggataaagctacagttagccatcaacaccatca 500
Query: 301 gagattggagaagaatacatttgagcaggctgtataaagtaaatggcctctgtattagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagattggagaagaatacatttgagcaggctgtataaagtaaatggcctctgtattagta 560
Query: 361 aaatggcaggtacttacccactacgtggacgattactataggttcctcctcagcaatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatggcaggtacttacccactacgtggacgattactataggttcctcctcagcaatctc 620
Query: 421 agcaatctacttggatgccga----ctttcgcctccagccatcacatgagacaccattaa 476
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 agcaatctacttggatgccgaatggctttcgcctccagccatcacatgagacaccattaa 680
Query: 477 ctctcactgctacacagggcaacatcaaccttcagctgccaggcacaaaagagcctttcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctcactgctacacagggcaacatcaaccttcagctgccaggcacaaaagagcctttcc 740
Query: 537 tgtgggttagaacattgagaggctggcctaccttgattaggacaatgagggacagtcaat 596
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 741 tgtgggttagaacattgagaggctggcctaccttgattagtacaatgagggacagtcaat 800
Query: 597 tctccagtgtcctggagatgagtgaagtgtggggcagtttaacccatt 644
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctccagtgtcctggagatgagtgaagtgtggggcagtttaacccatt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
