NACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAGCAACTCACTGACAGTGACTTTTTATCCCACACACCACAG
ATTCACTGTTTTGCATCCTCATTCTCTCACAGTCTACAACACGCAATTCT
TGGTCATGTCCCCTCTCCACACATCCTTTTTGTCAGAGCTCCCCTTCCAT
TCTGGCCCCGAATAAGAGAATCTTTAAATATGACATTTATTTTTCCTTGA
AGCTCGGCCAGTAGACGTCTCCATTACTCTCTAACAGCTAAGACTATCCT
TGGCAAGCCAGGTTTAATCATTCTCTTAACCAAAAACAAGGAAGAGAATT
TGATAATTTGCCTAAAAAATGAGCAGATGCTAAGAAGGACACATTTCCAT
CCTACGTTCCCTCCTCCCCAGTTTCAGTCAGAAATGAAAACTACTCTCTT
CTCCCTCTTTTCCAGGCAAAAGAAAGGGCTGATTTTACTAAGCAAGCAAG
ATGCCAACAGCCTCCTCCTCCTCAGTAGTCCAAGTTTCCTTCGCTTTCAA
CCACCAAAAGCGCCACTTATCCCCTATTTCCCACCCACTCCTTGCCACCC
CTGAAGGTTTCCGAGTCATCAGGGAACACGAGTGGGTGAAAACAGCGCCG
CCGCCTCCTCCTCCGCCTCCTCAGTGCGCCTCGGGTTCAGCACTGGACAG
CTCCCGCCCCAGCCAACAAATGGCAGTCAGCTGATTGACAGAGGCGCCGA
C

NCCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAGGTGGACTTCAGAAAA
TCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTC
ACCTGAGAAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGGCTAATATCAAAAATTCAGGTGACAGCAGATGCTG
GTGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
GGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTG
GACATAGTACTATCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCC
AGAAGATGCCCCAACGGGTAAGAAGGACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTA
CTCAGCTATTCAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGG
ACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCA
CACAATATGTACTCACTGATAAGTGGATACTAGCCCAAAACCTAGGATN

Query= MSMg01no529_k09.b1 MSMg01no529_k09.b1 CHROMAT_FILE:
MSMg01no529_k09.b1 PHD_FILE: MSMg01no529_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:42 2005
         (690 letters)



>mm_chr2_21288244_21289333
          Length = 1090

 Score = 1311 bits (678), Expect = 0.0
 Identities = 684/686 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagcaactcactgacagtgactttttatcccacacaccacagattcactgtttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcaactcactgacagtgactttttatcccacacaccacagattcactgtttt 264

                                                                       
Query: 65  gcatcctcattctctcacagtctacaacacgcaattcttggtcatgtcccctctccacac 124
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 gcatcctcattctctcacagtctacaacacgcaattcttgatcatgtcccctctccacac 324

                                                                       
Query: 125 atcctttttgtcagagctccccttccattctggccccgaataagagaatctttaaatatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcctttttgtcagagctccccttccattctggccccgaataagagaatctttaaatatg 384

                                                                       
Query: 185 acatttatttttccttgaagctcggccagtagacgtctccattactctctaacagctaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatttatttttccttgaagctcggccagtagacgtctccattactctctaacagctaag 444

                                                                       
Query: 245 actatccttggcaagccaggtttaatcattctcttaaccaaaaacaaggaagagaatttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actatccttggcaagccaggtttaatcattctcttaaccaaaaacaaggaagagaatttg 504

                                                                       
Query: 305 ataatttgcctaaaaaatgagcagatgctaagaaggacacatttccatcctacgttccct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataatttgcctaaaaaatgagcagatgctaagaaggacacatttccatcctacgttccct 564

                                                                       
Query: 365 cctccccagtttcagtcagaaatgaaaactactctcttctccctcttttccaggcaaaag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctccccagtttcagtcagaaatgaaaactactctcttctccctcttttccaggcaaaag 624

                                                                       
Query: 425 aaagggctgattttactaagcaagcaagatgccaacagcctcctcctcctcagtagtcca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagggctgattttactaagcaagcaagatgccaacagcctcctcctcctcagtagtcca 684

                                                                       
Query: 485 agtttccttcgctttcaaccaccaaaagcgccacttatcccctatttcccacccactcct 544
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 685 agtttccttcgctttcaaccaccaaaagcgccacttctcccctatttcccacccactcct 744

                                                                       
Query: 545 tgccacccctgaaggtttccgagtcatcagggaacacgagtgggtgaaaacagcgccgcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgccacccctgaaggtttccgagtcatcagggaacacgagtgggtgaaaacagcgccgcc 804

                                                                       
Query: 605 gcctcctcctccgcctcctcagtgcgcctcgggttcagcactggacagctcccgccccag 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gcctcctcctccgcctcctcagtgcgcctcgggttcagcactggacagctcccgccccag 864

                                     
Query: 665 ccaacaaatggcagtcagctgattga 690
           ||||||||||||||||||||||||||
Sbjct: 865 ccaacaaatggcagtcagctgattga 890


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)