Query= MSMg01no530_a16.b1 MSMg01no530_a16.b1 CHROMAT_FILE:
MSMg01no530_a16.b1 PHD_FILE: MSMg01no530_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:14 2005
(685 letters)
>mm_chr2_132729541_132730625
Length = 1085
Score = 1025 bits (530), Expect = 0.0
Identities = 551/558 (98%)
Strand = Plus / Minus
Query: 128 ctgtcctttcctctgctgtcctgggctctgctgtttagggcctagacagagtgcaggata 187
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1085 ctgtcctttcctctgctgtcctgggctctgctgtttagggcctagacagggtgcaggata 1026
Query: 188 ctcctgggtgcactacactaggctgggtggagtatacacacagtgtgcatgcctttaatc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ctcctgggtgcactacactaggctgggtggagtatacacacagtgtgcatgcctttaatc 966
Query: 248 ccagaactcaggaggcagatgcaggcagacatctgtgagtctgaggccagccaaggctcc 307
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 965 ccagaactcaggaggcagatgcaagcagacatctgtgagtctgaggccagccaaggctcc 906
Query: 308 ataatttttcaaatgaaaaatatttgcatgctagagcctggacagatcttccaaatcctg 367
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 905 ataatttttcaaatgaaaaatatttgcatgctatagcctggacagatcttccaaatcctg 846
Query: 368 gtcacaatgacctccttgattacatgtcaccttgattacatgttgcccatgagaattcag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gtcacaatgacctccttgattacatgtcaccttgattacatgttgcccatgagaattcag 786
Query: 428 cttccctagtctgccagaccaggccttcaggtcagccccttctttgctttgtatggttgg 487
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 785 cttccctagaatgccagaccaggccttcaggtcagcccctcctttgctttgtatggttgg 726
Query: 488 ctgagatttctgtaaaactcctggaggagttggctcccaacgttatgcagttttaggtag 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ctgagatttctgtaaaactcctggaggagttggctcccaacgttatgcagttttaggtag 666
Query: 548 catttctcccgtggttacacagctacatctcaaaggaataaattggtataagaggaaaag 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 catttctcccgtggttacacagctacatctcaaaggaataaattggtataagaggaaaag 606
Query: 608 gctaaatgccattgttctaaagaaaagtatggtcctttttttttaggacgagggggttaa 667
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 605 gctaaatgccattgttctaaagaaaagtatggtcctttttttttaggaagagggggttaa 546
Query: 668 catttggatacaaatggt 685
||||||||||||||||||
Sbjct: 545 catttggatacaaatggt 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_a16.g1 MSMg01no530_a16.g1 CHROMAT_FILE:
MSMg01no530_a16.g1 PHD_FILE: MSMg01no530_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:14 2005
(601 letters)
>mm_chr2_132614483_132615482
Length = 1000
Score = 1073 bits (555), Expect = 0.0
Identities = 588/601 (97%), Gaps = 8/601 (1%)
Strand = Plus / Plus
Query: 3 tatgtaaacaggagtttagctttgacgtcagagactcacctgcctctgtctcccaagtgc 62
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203 tatgtaaacaggagtttagctttgacctcagagactcacctgcctctgtctcccaagtgc 262
Query: 63 agggattaaaggtatgcaccaccacaccctgcttaaaattctgattgttt-cagtgacat 121
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 263 agggattaaaggtatgcaccaccacaccctgcttaaaattctgattgtttacagtgacat 322
Query: 122 ctgataattagatgttgtctctgcagtgtaggtcaatgggaacttggttctgggccacac 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 323 ctgataattagatgttgtctctgcagtgtaggtcaatgggaactcggttctgggccacac 382
Query: 182 cattcctctactgttgtagctttctgtctcctagccttagttgtctttcttcttacctga 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 383 cattcctctactgttgtagctttctgtctcctagccctagttgtctttcttcttacctga 442
Query: 242 taggcaggcttgtatgccgagctgagtggaaggaatggcctgcctggtccgtgttccacc 301
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 443 taggcaggcttgtatgctgagctgagtggaaggaatggcctgcctggtccatgttccacc 502
Query: 302 ctaagcctcatctcccactctcctgcccacagtgagcaaataagtatttggggagaaggg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctaagcctcatctcccactctcctgcccacagtgagcaaataagtatttggggagaaggg 562
Query: 362 atgaataatagagtttgtttcttgtttgtttggtttggataggctttggtttgagtattt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgaataatagagtttgtttcttgtttgtttggtttggataggctttggtttgagtattt 622
Query: 422 cttttgcggggagggtacttaaagatgctagtccagtttcttaccaggtaaaagattttt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cttttgcggggagggtacttaaagatgctagtccagtttcttaccaggtaaaagattttt 682
Query: 482 tttaaaaaatttctttttttggattaacctttt-aaaaaaataagtaaataaataataag 540
|| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 683 tt-aaaaaatttctttttt-ggattaacctttttaaaaaaataagtaaataaataataag 740
Query: 541 attttatttatttatttattttatatataaatgacaagtacactgtagctatcctcagac 600
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attttatttatttattt----tatatataaatgacaagtacactgtagctatcctcagac 796
Query: 601 a 601
|
Sbjct: 797 a 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space: 585090
Effective search space used: 585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
