Query= MSMg01no530_a18.b1 MSMg01no530_a18.b1 CHROMAT_FILE:
MSMg01no530_a18.b1 PHD_FILE: MSMg01no530_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:14 2005
(669 letters)
>mm_chr2_86110594_86111662
Length = 1069
Score = 1218 bits (630), Expect = 0.0
Identities = 660/670 (98%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 1 gagataacttcagtaatctgaaaaa-aaggctatctccctagcacaaccttaatttatag 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1064 gagataacttcagtaatctgaaaaacaaggctatctccctagcacaaccttaatttataa 1005
Query: 60 gtccatcatagtgaaaagaaggtgttaattatatcaagcagaatagcatgggaagaaaca 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1004 gtccatcatagtgaaaagaaggtgttaattatatcaggcagaatagcatgggaagaaaca 945
Query: 120 atcactagagttttatttcctatgtgtttttaaagaaatataattctacaaacctacata 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 atcactagagttttttttcctatgtgtttttaaagaaatataattctacaaacctacata 885
Query: 180 gatcaaataatttctggaagagttacataaattaaaatacttggagagatatcaaaacca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gatcaaataatttctggaagagttacataaattaaaatacttggagagatatcaaaacca 825
Query: 240 gttttctggaaatcagacatagattaaatatattataaatatatgagccatgattcacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gttttctggaaatcagacatagattaaatatattataaatatatgagccatgattcacca 765
Query: 300 cgattcactacgggcttcttattagaaacattgtgtctcatggggtgtttttctgaatca 359
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 caattcactacaggcttcttattagaaacattgtgtctcatggggtgtttttctgaatca 705
Query: 360 actcatatttatttggctataatatgtgaatgtattgtgccttttatttctgggttacaa 419
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 actcatatttatttgcctataatatgtgaatgtattgtgccttttatttctgggttacaa 645
Query: 420 aagaatagtaaaattaaaaattctatcatgttatcattctaagatgctcatggagttaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aagaatagtaaaattaaaaattctatcatgttatcattctaagatgctcatggagttaat 585
Query: 480 aaatttgtgattttcatcatttaataatatggattggtccatatgttccattagcctaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aaatttgtgattttcatcatttaataatatggattggtccatatgttccattagcctaag 525
Query: 540 gaatgaatcgtttttcatttcttagtattatattcaaagaatgtagtctcccctccccca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaatgaatcgtttttcatttcttagtattatattcaaagaatgtagtctcccctccccca 465
Query: 600 gcctgaaacctgcttgctcaggggtggagcttgctgctcaatctttctgctatgcccact 659
||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||
Sbjct: 464 gcctgaaacctgcttgctcaggggtggagcttgctgctcaatcattctgccacgcccact 405
Query: 660 gctggagctt 669
||||||||||
Sbjct: 404 gctggagctt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_a18.g1 MSMg01no530_a18.g1 CHROMAT_FILE:
MSMg01no530_a18.g1 PHD_FILE: MSMg01no530_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:14 2005
(622 letters)
>mm_chr2_85992276_85993296
Length = 1021
Score = 1187 bits (614), Expect = 0.0
Identities = 620/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 1 ttttgcaatgttaatataaaatgtgtgcttgctgtctcctaagaactaagaagctggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgcaatgttaatataaaatgtgtgcttgctgtctcctaagaactaagaagctggggt 260
Query: 61 caccagatgctgattcttaggattatcaaaaggaaacctgaagaaaatgactgtatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccagatgctgattcttaggattatcaaaaggaaacctgaagaaaatgactgtatggat 320
Query: 121 atgtaaaaataaaagactgggtttatgttctgcaggagatgagctatctagagagaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtaaaaataaaagactgggtttatgttctgcaggagatgagctatctagagagaatat 380
Query: 181 tttagaatagtaagagagaactgcttaaaaaagtgtccccagcatagtatagagagctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagaatagtaagagagaactgcttaaaaaagtgtccccagcatagtatagagagctgt 440
Query: 241 ctggagatgtccagaggaagcagaacaaaaagaatgcaagctggaaagctatttccttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggagatgtccagaggaagcagaacaaaaagaatgcaagctggaaagctatttccttgg 500
Query: 301 actcatgatttgacttgagtcatttgtttctctgctcccagaaacccctttctcagatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcatgatttgacttgagtcatttgtttctctgctcccagaaacccctttctcagatct 560
Query: 361 cctgtccaagacaaagctggtccttggcaaaataatatggaaaatacattttgatttttt 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 cctgtccaagacaaagctggtccttggcaaaataatatgcaaaatacattttgatttttt 620
Query: 421 ttacttgagtacactttattgcagccgtgaaatttagcaaaagacattgttgtacattag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttacttgagtacactttattgcagccgtgaaatttagcaaaagacattgttgtacattag 680
Query: 481 tgcaaattgagctgatataagattttgcaaacctggcaagacaaaaattagtattttatt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaatt-agctgatataagattttgcaaacctggcaagacaaaaattagtattttatt 739
Query: 541 aaagactaaactttccattcaaaaaatgataatctgttaaaaactgatcaacttttaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaagactaaactttccattcaaaaaatgataatctgttaaaaactgatcaacttttaatg 799
Query: 601 aaggcatgacttcctcattgtt 622
||||||||||||||||||||||
Sbjct: 800 aaggcatgacttcctcattgtt 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
