Query= MSMg01no530_j17.b1 MSMg01no530_j17.b1 CHROMAT_FILE:
MSMg01no530_j17.b1 PHD_FILE: MSMg01no530_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:59 2005
(708 letters)
>mm_chr2_95969682_95970789
Length = 1108
Score = 1319 bits (682), Expect = 0.0
Identities = 699/706 (99%), Gaps = 4/706 (0%)
Strand = Plus / Plus
Query: 5 gaattcttagtttt--tcctgctttgaatttagaagttttgctactaagtttaatctatg 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttagttttagt--tgctttgaatttagaagttttgctactaagtttaatctatg 262
Query: 63 cctatgaacatgtacgaaatgctacaaaaataattttgtttcaatgaactaattctgaca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctatgaacatgtacgaaatgctacaaaaataattttgtttcaatgaactaattctgaca 322
Query: 123 gtttgtaatgaataacctttctccaaaaagaaataatattgaaaaacaactttattggga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtttgtaatgaataacctttctccaaaaagaaataatattgaaaaacaactttattggga 382
Query: 183 ttacaggtaacaaaggaaaactcattcaattggcaatctcttgtgctttcacaggaactg 242
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 ttacaggtaacaaaggaaaactcattcaattggcaatctcttctgctttcacaggaactg 442
Query: 243 tgatgaaaagaaaccaagatataaacatcaagtaggtggctgcttctaagatagaacaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgatgaaaagaaaccaagatataaacatcaagtaggtggctgcttctaagatagaacaca 502
Query: 303 catatttgaaataatcattattactgattagaatgctgcttagtaaaatcatctctgcct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catatttgaaataatcattattactgattagaatgctgcttagtaaaatcatctctgcct 562
Query: 363 taatttataaactgctagtctaacattatacaaatgatgtagcaatttcatagaatctca 422
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 563 taatttataaactgctagtctaacattatacaaatgatgtagcaatgtcatagaatctca 622
Query: 423 tgttttgaaccaaaacctggatatgaaaattgtaaagtcaaagcctttttaattcattaa 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 623 tgttttgaaccaaaacctggatatgaaaattgtaaagtcaaagcctttttaattaattaa 682
Query: 483 ttaattaatctatttactttgcatcctcattgcagcttctcctccctcctttcctcccag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaattaatctatttactttgcatcctcattgcagcttctcctccctcctttcctcccag 742
Query: 543 actctccttcttacctctgtccttaaactccatttcatttctcctcagagaaagagagaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 actctccttcttacctctgtccttaaactccatttcatttctcctcagagaaagagagaa 802
Query: 603 tgtttatgcatatcaacctgccttggcatatcaagttgaaatacggctggatgcatcttc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgtttatgcatatcaacctgccttggcatatcaagttgaaatacggctggatgcatcttc 862
Query: 663 tgttgatgctagacagaactgtgtaataatgggaaagtgatccaaa 708
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 tgttgatgctagacagaactgtgtaataatgggaaagtgatccaaa 908
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space: 766404
Effective search space used: 766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_j17.g1 MSMg01no530_j17.g1 CHROMAT_FILE:
MSMg01no530_j17.g1 PHD_FILE: MSMg01no530_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:59 2005
(616 letters)
>mm_chr2_96151315_96152332
Length = 1018
Score = 828 bits (428), Expect = 0.0
Identities = 458/480 (95%), Gaps = 20/480 (4%)
Strand = Plus / Minus
Query: 1 tgttccttaaatattatttcttatatgcttggtgatctacttcttaagaagcagtttg-- 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgttccttaaatattatttcttatatgcttggtgatctacttcttaagaagcagtttgaa 421
Query: 59 gttttatttaatgtttgaaactaagggagtctttggtttactatttgttttcctaacgtg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gttttatttaatgtttgaaactaagggagtctttggtttactatttgttttcctaacgtg 361
Query: 119 gaaatcatgcttttgtgcacattcaactttataaccatttattttaatgatttacccact 178
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 360 gaaatcatgcttttgtgcacattctactttataaccatttattttaatgatttacccact 301
Query: 179 ctggttggaaaaaaaagaacataatacatccttgtcctcctgtgaactattggaccattt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctggttggaaaaaaaagaacataatacatccttgtcctcctgtgaactattggaccattt 241
Query: 239 actgtgatcttttacatggttccctctctattaaattctt------------------tt 280
|||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 actgtgatcttttacatggttccctctctattaaattcttttattattattattattatt 181
Query: 281 attattattattattattattattattattagatatttctttatttacatttcaaatgct 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 attattattattattattattattattattagatatttctttatttacatttcaaatgct 121
Query: 341 atcctgaaagttctctataccctccccacgccctgctcccctacccatccatttccactt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120 atcctgaaagttctctataccctccccacgccctgctcccctacccatccattcccactt 61
Query: 401 cttggctctggagttcccctgtacaggggcatataaagtttgcaagacctaggtgcctct 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cttggctctggagttcccctgtacaggggcatataaagtttgcaagacctaggtgcctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1018
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1008
Effective search space: 610848
Effective search space used: 610848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
