Query= MSMg01no531_n09.b1 MSMg01no531_n09.b1 CHROMAT_FILE:
MSMg01no531_n09.b1 PHD_FILE: MSMg01no531_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:36 2005
(626 letters)
>mm_chr2_85522242_85523267
Length = 1026
Score = 1141 bits (590), Expect = 0.0
Identities = 614/622 (98%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgctgttattctgttagatggacatagctataaactgctctctaagtactta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatgctgttattctgttagatggacatagctataaactgctctctaagtactta 264
Query: 65 tctttatatgagagtttagcacaactctcaacccttatcagaaaagcagtaaattggaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctttatatgagagtttagcacaactctcaacccttatcagaaaagcagtaaattggaag 324
Query: 125 ggtacaaaattaacctataacaataggtagcttttctatacatagtaacaatcacattga 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 ggtacaaaattaacctataacaataggtagcttttctatacacagtaacaatcacattga 384
Query: 185 gaaaaaattatagaaacatctccactcacattagtaatataaaaaatatctaggaataaa 244
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 gaaaaaattatagaaacatttccactcacattagtaatgtaaaaaatatctaggaataaa 444
Query: 245 ccaaacaaaggatgtaaaatagtctacagagaaaactttgaatctataaagaaagagatt 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 ccaaacaaaggatgtaaaatagtctacagagaaaactttgaatctataaa-aaagagatt 503
Query: 305 gagatagatgcttaaagatggaactacacgtcatgctcatggacttgtagaactgagcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagatagatgcttaaagatggaactacacgtcatgctcatggacttgtagaactgagcat 563
Query: 365 ttgacaaaagaactgtattgatttagtgcaatttcattcaaaatccatatattgcagaaa 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgacaaaagaattgtattgatttagtgcaatttcattcaaaatccatatattgcagaaa 623
Query: 425 tagaagagacaatactaaaatttgtgtggaaccacaaaatacctggagaggcaaagcaat 484
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagaagagacagtactaaaatttgtgtggaaccacaaaatacctggagaggcaaagcaat 683
Query: 485 cctaagcaaaaagaaaaatgctggagagattatcattccaaatttcaacatgtattattg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctaagcaaaaagaaaaatgctggagagattatcattccaaatttcaacatgtattattg 743
Query: 545 agctacatcaataaagtcctatatggtactggtgcagatcggacatgtaattcaatggaa 604
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 744 agctacatcaataaagtcctatatcttactggtgcagatcggacatgtaattcaatggaa 803
Query: 605 taaaattaaagactcaaacagg 626
||||||||||||||||||||||
Sbjct: 804 taaaattaaagactcaaacagg 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_n09.g1 MSMg01no531_n09.g1 CHROMAT_FILE:
MSMg01no531_n09.g1 PHD_FILE: MSMg01no531_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:36 2005
(632 letters)
>mm_chr2_85664787_85665817
Length = 1031
Score = 783 bits (405), Expect = 0.0
Identities = 411/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 1 cctgagccctaaagggaggaatggctaagcaaatctatttgtaataagatccaccaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cctgagccctaaagggaggaatggctaagcaaatctatttgtaataagatccaccaaaag 353
Query: 61 tacttttgaatcaaaagtagactacagagatttgcttgcagggagactataagaatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tacttttgaatcaaaagtagactacagagatttgcttgcagggagactataagaatatca 293
Query: 121 aaattgtggaatttacataaaaaaatacttcagccgcagttctacatgtgttgagaattg 180
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 292 aaattgtggaatttacat-aaaaaatacttcagccgcagttctacatatgttgagaattg 234
Query: 181 atatttctcttattgaatttatttacattatttatggagagataagactgagggaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atatttctcttattgaatttatttacattatttatggagagataagactgagggaaatga 174
Query: 241 ggtctagtaaccagcccaaattgggatccaactcacggagatgctccaagaactgacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggtctagtaaccagcccaaattgggatccaactcacggagatgctccaagaactgacact 114
Query: 301 attaataatgctgtggtatgtttacagacaagggcctggcatggctgtgctcttagaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 attaataatgctgtggtatgtttacagacaagggcctggcatggctgtgctcttagaagc 54
Query: 361 ccaataagcagctgagttagatgcagatacttacacccaaccaatggacagaa 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ccaataagcagctgagttagatgcagatacttacacccaaccaatggacagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|