Query= MSMg01no532_m07.b1 MSMg01no532_m07.b1 CHROMAT_FILE:
MSMg01no532_m07.b1 PHD_FILE: MSMg01no532_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:47 2005
(555 letters)
>mm_chr2_100203823_100204777
Length = 955
Score = 555 bits (287), Expect = e-162
Identities = 305/315 (96%), Gaps = 7/315 (2%)
Strand = Plus / Minus
Query: 241 aagccattgctcttctattcaggaattttccccctgtgcccatatcttcgaggcttttcc 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 955 aagccattgctcttctattcaggaattttccccctgtgcccgtatcttcgaggcctttcc 896
Query: 301 ccactttctcttctataagtttcagtgtctctggttttatgtggagttccttgacccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ccactttctcttctataagtttcagtgtctctggttttatgtggagttccttgacccact 836
Query: 361 tagatttgacctgtgcagactagtctctgagggatccgggaaccaagatggctccccagt 420
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 835 tagatttgacctgtgcagactagtctctgagggatctgggaaccaagatggctccccag- 777
Query: 421 ccccaggtgctctggcaaagccctctccgtggtatgtgacttttttatagtagtaggcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ------gtgctctggcaaagccctctccgtggtatgtgacttttttatagtagtaggcac 723
Query: 481 tttaatgaatggaaggtagtactttactttataagtgcattttcatattggagagtgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttaatgaatggaaggtagtactttactttataagtgcattttcatattggagagtgatg 663
Query: 541 ttgattcctcccacc 555
|||||||||||||||
Sbjct: 662 ttgattcctcccacc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_m07.g1 MSMg01no532_m07.g1 CHROMAT_FILE:
MSMg01no532_m07.g1 PHD_FILE: MSMg01no532_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:47 2005
(658 letters)
>mm_chr2_100172547_100173604
Length = 1058
Score = 1265 bits (654), Expect = 0.0
Identities = 657/658 (99%)
Strand = Plus / Plus
Query: 1 actgagtatccctggtgaatttatgtatttgtttgtcttacaatggatctcttggtgcat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 actgagtatccctggtgaatttatgtatttgtttttcttacaatggatctcttggtgcat 260
Query: 61 attttccccctaattcattgttcccctttataaaacagaagttctgatgttcacattatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttccccctaattcattgttcccctttataaaacagaagttctgatgttcacattatg 320
Query: 121 ttttccttaccagctgcctttttaagttgtttagtttctctttcagtcaattttgatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttccttaccagctgcctttttaagttgtttagtttctctttcagtcaattttgatatc 380
Query: 181 caaacatttgaacataccattagtaaacactgctgattttgtttcacttctgtcaatacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaacatttgaacataccattagtaaacactgctgattttgtttcacttctgtcaatacc 440
Query: 241 tcttcgctgccttctagtccatttgcttcagggcattgtcaaataatggcattgcttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttcgctgccttctagtccatttgcttcagggcattgtcaaataatggcattgcttatt 500
Query: 301 gattcactctctgtcttctgaaagaagatggctagcaaagcttgaatgttccttatgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattcactctctgtcttctgaaagaagatggctagcaaagcttgaatgttccttatgttc 560
Query: 361 aagagctgaacataaaatttaggatgaacacttctctgtactaaattcacagagaagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagagctgaacataaaatttaggatgaacacttctctgtactaaattcacagagaagcag 620
Query: 421 aagttctgcatatttgccttaggccagaacctttcaaagtagaatatccagtgagttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagttctgcatatttgccttaggccagaacctttcaaagtagaatatccagtgagttctt 680
Query: 481 cagatatgtttttgcatcatatgtaatagaatctgtgtaataccacacatagtagaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagatatgtttttgcatcatatgtaatagaatctgtgtaataccacacatagtagaatgt 740
Query: 541 ggatgttgatgctgtgtactacatttataattttttatcttgaatattttacgtcagtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggatgttgatgctgtgtactacatttataattttttatcttgaatattttacgtcagtat 800
Query: 601 tgataaccgtaacagtagttcttatggaaagtcaccatacaataaatattattccaat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgataaccgtaacagtagttcttatggaaagtcaccatacaataaatattattccaat 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
