NGGGGATTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTAGAATGGATATTAATGTAACGTCATTAGAATACTGTTGG
CTTCTCACCAATTCAGATTCTATTCATAAACTTGGTATACTTTGTAAACA
TTGTAAACCCTCAAGGCAGAAAAGTGGCCAGGAACCACAACCCTCCGCCC
CACCCCACCTCCACACACATACCCTGAGGCTCCCTAGCAGGTATGCTCGC
TCCCCAGACTTCCCTAATGATCAGAAGAGTCTTTCCAAGCCCTATGCCTG
GAGGTTGGCCAGGTCCTGAGCACAAAAACCCACCAATCCCAGGACTTGAA
ATTCCACCAATCCTCACTCTGGAACTCTCCATCCTGGAAAGCTCTGCCCC
ACTTAGAAAACATACATAAGCCTTACCTTCTGCTCAGTTCCTGGCTGTCT
TCTCATCTGAGTGGAGGCAGCCTGCCTTCCTGGGTTTTCCCCTCTGAATA
ATTCTCTTGTGTGAGGTTTGTGGTGCTTTGTGACTTTGTAGTATTCCTTG
GCTCCCTACCGCCAGGATACCTTTCCCTTTAGAGCTACAACACTTACAAG
TACAGTAACAATAATATTCCTGTTGGAGAGACATGGTGAATTGTTTAATT
TAAATCTAGTACAATGGACAGGACTTTAGTTATGCTATTTGGAGCAGTCA
AGATCTGATACTTAGGAAACTGATGATGTTGAAAAATATGAGAGATCAGA

NNNNGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGAAGCATTGAAGAAGC
TGAATGGGAGGGCAACACCAGTAGTCTCAACTAATCTGGACCCCAGGGAG
CTCCCTGAGAATGAAACACAAACCAGGCAGCATACACAGGCTCCTCTGAG
GCCCCTGGCACATAAATAGCAGAGGACTAGTCTGGCTTCAGTAAGATGAG
ACATGTCTAATACCAAGAGACTAGAGTCCCTAGGGGAGGGGGAGACCTGG
TATGTGTCTGGAGCACCCTCTGAGAGCCAAGAGAGAGGAGGAATGGGATA
AGGAACTATGGGAGGGGTGTAGAGGCTGGATTATAAATAAAAAAATAAAA
TAAAATAAAATAAAATAAAATAAAATAAAAAATGAATAGAGACGGGGCAG
TTGGGGCCCATGCCTTTAATTCCAGCACTCCCAGAAGCAGATGCTGAGGG
ATCCCTGTCAGTTAAAGGCCAGCCAGGGTGAAACAGTGAAACCCTGTCTA
AATCGATCAATCAATCAATCAATCAAACAAACCATGAGATGGAAACTTCA
TGGAATCTATGAGAGTAACCAGAGCAAAGACTCCTAGTAATGGCACATGG
AACGTAAAGGAACAAACTGCTCATATTCTGTAACCAGGCACTAAAGAATC
TTATCTTTTAGTTTTATGAGGTTCTTTGTGTCAATCATTGGCATTAGTCT
GTTAG

Query= MSMg01no532_o17.b1 MSMg01no532_o17.b1 CHROMAT_FILE:
MSMg01no532_o17.b1 PHD_FILE: MSMg01no532_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:59 2005
         (693 letters)



>mm_chr2_62956482_62957574
          Length = 1093

 Score =  762 bits (394), Expect = 0.0
 Identities = 403/406 (99%)
 Strand = Plus / Minus

                                                                        
Query: 288  cccaggacttgaaattccaccaatcctcactctggaactctccatcctggaaagctctgc 347
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 cccaggacttgaaattccacgaatcctcactctggaactctccatcctggaaagctctgc 1034

                                                                        
Query: 348  cccacttagaaaacatacataagccttaccttctgctcagttcctggctgtcttctcatc 407
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1033 cccacttagaaaacatacataagccttgccttctgctcagttcctggctgtcttctcatc 974

                                                                        
Query: 408  tgagtggaggcagcctgccttcctgggttttcccctctgaataattctcttgtgtgaggt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  tgagtggaggcagcctgccttcctgggttttcccctctgaataattctcttgtgtgaggt 914

                                                                        
Query: 468  ttgtggtgctttgtgactttgtagtattccttggctccctaccgccaggatacctttccc 527
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 913  ttgtggtgctttgtgactttgtagtattccttggcaccctaccgccaggatacctttccc 854

                                                                        
Query: 528  tttagagctacaacacttacaagtacagtaacaataatattcctgttggagagacatggt 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  tttagagctacaacacttacaagtacagtaacaataatattcctgttggagagacatggt 794

                                                                        
Query: 588  gaattgtttaatttaaatctagtacaatggacaggactttagttatgctatttggagcag 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793  gaattgtttaatttaaatctagtacaatggacaggactttagttatgctatttggagcag 734

                                                          
Query: 648  tcaagatctgatacttaggaaactgatgatgttgaaaaatatgaga 693
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733  tcaagatctgatacttaggaaactgatgatgttgaaaaatatgaga 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)