Query= MSMg01no533_f08.b1 MSMg01no533_f08.b1 CHROMAT_FILE:
MSMg01no533_f08.b1 PHD_FILE: MSMg01no533_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:31 2005
(490 letters)
>mm_chr2_91655973_91656862
Length = 890
Score = 799 bits (413), Expect = 0.0
Identities = 454/487 (93%), Gaps = 30/487 (6%)
Strand = Plus / Plus
Query: 4 ggaattccatcaaataagccacatgtcttcagtagtacttgttcttagtttcttttctga 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatcaaagaagccacatgtcttcagtagtacttgttcttagtttcttttctga 263
Query: 64 gctaggaagttccaggatttctgtaggagctcttgacttgtcttttattttattttattt 123
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gctaggaagttccaggatttctgtaggagctcttgacttgtc------------------ 305
Query: 124 tattttattttattttattttattttattttattttttgacttgtctttaataacaaata 183
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ------------ttttattttattttattttattttttgacttgtctttaataacaaata 353
Query: 184 taactcagagccaagaagaagggcagcttttgccatctgaaatcgttagagagatatggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taactcagagccaagaagaagggcagcttttgccatctgaaatcgttagagagatatggc 413
Query: 244 tgtatcattttgaaatggtctttatttcttcctttcacatataaactttagaagtgtaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgtatcattttgaaatggtctttatttcttcctttcacatataaactttagaagtgtaaa 473
Query: 304 gatgcactataaagcactatgaagatgttgttcttgctgggaggtgatagtgcacacctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gatgcactataaagcactatgaagatgttgttcttgctgggaggtgatagtgcacacctt 533
Query: 364 taatcccagctcttggaagatggaggcaggcagatctctgtgagtttgaaaatagactgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 taatcccagctcttggaagatggaggcaggcagatctctgtgagtttgaaaatagactgg 593
Query: 424 tctacagagcgagttccagacaatcagggctacacatatagaaaccctttttctaaaaac 483
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 594 tctacagagcgagttccaggcaatcagggctacacatagagaaaccctttttctaaaaac 653
Query: 484 aaacaaa 490
|||||||
Sbjct: 654 aaacaaa 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_f08.g1 MSMg01no533_f08.g1 CHROMAT_FILE:
MSMg01no533_f08.g1 PHD_FILE: MSMg01no533_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:31 2005
(240 letters)
>mm_chr2_91851381_91852020
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%)
Strand = Plus / Minus
Query: 1 aggacactcattcctggacgctctactacggaaggagcagcctctgtccattagctgatt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 337 aggacactcattcctggacgctctactacggaaggagcagcctccgtccattagctgatt 278
Query: 61 aacacgtgccttcattcacctgctcagccagtctccaaacgcctgtgttctacatgagcg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aacacgtgccttcattcacctgctcagccagtctccaaacgcctgtgttctacatgagca 218
Query: 121 tgcaatgcattggctatacccatgagagctgagcctggcaggctccatgcctataatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tgcaatgcattggctatacccatgagagctgagcctggcaggctccatgcctataatccc 158
Query: 181 gacactggggagactaaggcaggaggattacgagtttgaggtcatcctggacgaatcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gacactggggagactaaggcaggaggattacgagtttgaggtcatcctggacgaatcagc 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
