Query= MSMg01no535_n21.b1 MSMg01no535_n21.b1 CHROMAT_FILE:
MSMg01no535_n21.b1 PHD_FILE: MSMg01no535_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:48 2005
(613 letters)
>mm_chr2_91719335_91720347
Length = 1013
Score = 1156 bits (598), Expect = 0.0
Identities = 607/610 (99%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 5 gaattcagaaacctcttgcctctgaatgcttaggattacaagtgtgagccaccgcttgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagaaacctcttgcctctgaatgcttaggattacaagtgtgagccaccgcttgcc 263
Query: 65 ctgctccacccccatactctttctgagtgcttgattttataaacacttgctgaaggaatg 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgctccacccccatactctttctgagtgcttgattttataaacacttgctgaaggaatg 323
Query: 125 tgtttccaaacttcaatatttatggatttaatagggtaaagatcactacatgagcattta 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctttccaaacttcaatatttatggatttaatagggtaaagatcactacatgagcattta 383
Query: 185 tgtttctatctattccttatgttccccacatccttaatggtgctgccttgtcttggctgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtttctatctattccttatgttccccacatccttaatggtgctgccttgtcttggctgg 443
Query: 245 ccaagtgctttatctctttttctgcatgttactgcccccccc-tcataattctgtagaag 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 ccaagtgctttatctctttttctgcatgttactgccccccccctcataattctgtagaag 503
Query: 304 ttctttataaattaaaaaattaacttataaaaggagtttcttgtcatttgtctttgactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttctttataaattaaaaaattaacttataaaaggagtttcttgtcatttgtctttgactt 563
Query: 364 tgttgaaggttatttttgtcatagaacttattttaagtcaaaattatacacctttccttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgttgaaggttatttttgtcatagaacttattttaagtcaaaattatacacctttccttt 623
Query: 424 tatggttcctaggctttgtgtcatcattaagataatttcctaccttttttttggtttttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatggttcctaggctttgtgtcatcattaagataatttcctaccttttttttggtttttg 683
Query: 484 gtttttcgagacagggtttctctgtatagccctggctgtcctggaactcactctgtagac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtttttcgagacagggtttctctgtatagccctggctgtcctggaactcactctgtagac 743
Query: 544 caggctggcctcaaactcagaaatctgcctgcctctgcctccggagtgctgggactaaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caggctggcctcaaactcagaaatctgcctgcctctgcctccggagtgctgggactaaag 803
Query: 604 gcgtgtgcca 613
||||||||||
Sbjct: 804 gcgtgtgcca 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_n21.g1 MSMg01no535_n21.g1 CHROMAT_FILE:
MSMg01no535_n21.g1 PHD_FILE: MSMg01no535_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:48 2005
(645 letters)
>mm_chr2_91854737_91855780
Length = 1044
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%), Gaps = 1/360 (0%)
Strand = Plus / Minus
Query: 286 tttcctcttcctcctcttcttcctcttcctcttttctttctctctttccttctcttgttt 345
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1044 tttcctcttcctcctcttcttcctcttcctcttttctttccctctttccttctcttgttt 985
Query: 346 tctggtgttttgaaacagggtttctctgtgtaacagccctgactgctctggaacttgcac 405
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 tctggtgttttggaacagggtttctctgtgtaacagccctgactgctctggaacttgcac 925
Query: 406 tgcaaaccaggctggcagagatcctcctgcctctgccccctgagtgctgggattaagggc 465
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 924 tgcaaaccaggctggcagagatcctcctgcctctgccccctgagtactgggattaagggc 865
Query: 466 gtgggccaccatgcccagctcagacttcttttcttcatgcttatagtgggaaaaatggtc 525
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 864 gtgggccaccatgcccagctcagacttcttttcttcatgcttatagtaggaaaaatggtc 805
Query: 526 aaagtagggttctcatgaaaagtcaactagaatctccccacacacacacacacctttgtc 585
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 aaagtagggttctcatgaaaagtcaactagaatctcccc-cacacacacacacctttgtc 746
Query: 586 tcaagtatacatgtgtgtatgcagtggagcacatgtaaaagtctgcaagtgcatgtgtgt 645
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcaagtatacatgtgtgtatgccgtggagcacatgtaaaagtctgcaagtgcatgtgtgt 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
