Query= MSMg01no536_e11.b1 MSMg01no536_e11.b1 CHROMAT_FILE:
MSMg01no536_e11.b1 PHD_FILE: MSMg01no536_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:20 2005
(415 letters)
>mm_chr2_83892313_83893127
Length = 815
Score = 702 bits (363), Expect = 0.0
Identities = 391/415 (94%), Gaps = 24/415 (5%)
Strand = Plus / Plus
Query: 1 tgtttgacttgtatcttttgtctgttactgaattaagggtgagaaactgtttgtttggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtttgacttgtatcttttgtctgttactgaattaagggtgagaaactgtttgtttggga 264
Query: 61 caaagtactctatgctccattaaaagacaaacaaacaacacacacacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagtactctatgctccattaaaagacaaacaaacaacacacacacacacacacacaca 324
Query: 121 cacacacacacacacacacacacacacacaattgttgttttgagcaattccttgcaagtt 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 cacacacacacacacacacacacaca----attgttgttttgagcaattccttgcaagtt 380
Query: 181 tcaaaacaagcagtttaccaatgagtaatttaatcttagaagctgatcagaaaaaaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaaacaagcagtttaccaatgagtaatttaatcttagaagctgatcagaaaaaaaaaa 440
Query: 241 aatacagttgattttccttacaatttcctttctttctttctttctttctttctttctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatacagttgattttccttacaatttcctttctttctttctttctttctttctttctttc 500
Query: 301 tttctttctttctttctttctttctttctttctttctttctttctttctttctttctttc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctttctttctttctttctttctttctttctttctttctttctttctttctttct--- 557
Query: 361 tttctttctttctttctgtctctctctctctcttccttccttctttccttccttc 415
||||||||||||||||||||||||||||||||||||||
Sbjct: 558 -----------------gtctctctctctctcttccttccttctttccttccttc 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 170
Number of extensions: 58
Number of successful extensions: 58
Number of sequences better than 10.0: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_e11.g1 MSMg01no536_e11.g1 CHROMAT_FILE:
MSMg01no536_e11.g1 PHD_FILE: MSMg01no536_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:20 2005
(622 letters)
>mm_chr2_83872441_83873462
Length = 1022
Score = 843 bits (436), Expect = 0.0
Identities = 444/450 (98%), Gaps = 6/450 (1%)
Strand = Plus / Minus
Query: 179 atgcaccacaatcttgcgcacaggccaatctgatgggtacagtttctaaagtcaggtttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 atgcaccacaatcttgcgcacaggccaatctgatgggtacagtttctaaagtcaggtttc 963
Query: 239 ctcttccaaataactttagcttatgtcaagttgacataaaactagccagcacagcaaaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ctcttccaaataactttagcttatgtcaagttgacataaaactagccagcacagcaaaat 903
Query: 299 tggtgaataaaacaaatatctggtggaatagagaagt------acacacacacacacaca 352
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 902 tggtgaataaaacaaatatctggtggaatagagaagtacacacacacacacacacacaca 843
Query: 353 cacacacacacacacacacattaaaattttaaaaaatgtttatttgattttaacatttag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cacacacacacacacacacattaaaattttaaaaaatgtttatttgattttaacatttag 783
Query: 413 aaagagaattgaataatgcccaaagcatctaggacattgttgaaggaatgatagctgaca 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaagagaattgaataatgcccaaagcatctaggacattgttgaaggaatgatagctgaca 723
Query: 473 tgctataacaggaacaagtcaccaaagacaatgaactccagaagctgaggcacaaaacag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgctataacaggaacaagtcaccaaagacaatgaactccagaagctgaggcacaaaacag 663
Query: 533 tttatgcacagggacatggaagttacccaaggtaagggcagaaaggtagaaaagactgtg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttatgcacagggacatggaagttacccaaggtaagggcagaaaggtagaaaagactgtg 603
Query: 593 agtccactctgtacttgaaaatgatcataa 622
||||||||||||||||||||||||||||||
Sbjct: 602 agtccactctgtacttgaaaatgatcataa 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
