Query= MSMg01no536_o11.b1 MSMg01no536_o11.b1 CHROMAT_FILE:
MSMg01no536_o11.b1 PHD_FILE: MSMg01no536_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:08 2005
(574 letters)
>mm_chr2_41120691_41121666
Length = 976
Score = 1069 bits (553), Expect = 0.0
Identities = 566/571 (99%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaataaacttactctgaagaaaaagttttcttatatctcatatatcccttctat 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaataaacagactctgaagaaaaagttttcttatatctcatatatcccttctat 264
Query: 65 atattatatagttatatatattacctatatatata--aaggtaagtatcatgcttgatca 122
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 atattatatagttatatatattacctatatatatataaaggtaagtatcatgcttgatca 324
Query: 123 tttctttgggcttaattttcactggaaggcactcatggtcatgtaaacttaaccaaatct 182
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttctttgggcttaatgttcactggaaggcactcatggtcatgtaaacttaaccaaatct 384
Query: 183 ttagaaatctctctggttaattagctcttgtgttacataggatcctagaactaatgaaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttagaaatctctctggttaattagctcttgtgttacataggatcctagaactaatgaaag 444
Query: 243 ggccctttagaatttagtaggcttgtttctgcttctactattctgttcctttgacctata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggccctttagaatttagtaggcttgtttctgcttctactattctgttcctttgacctata 504
Query: 303 tgttggtttgtttgtcagtactgtacagttttgtgattatttttatgccatagatcagga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgttggtttgtttgtcagtactgtacagttttgtgattatttttatgccatagatcagga 564
Query: 363 ttggacacagtgatatatcaactctgcccttcctgctagaattgctgtgactattttggg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttggacacagtgatatatcaactctgcccttcctgctagaattgctgtgactattttggg 624
Query: 423 actttttatgtttaagtgaaaattctcagaatgactattttagtcctatgaagaacataa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actttttatgtttaagtgaaaattctcagaatgactattttagtcctatgaagaacataa 684
Query: 483 tggggattttatgggggttatattgaatatcacttctgaaaaatatttgtgtttacatta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggggattttatgggggttatattgaatatcacttctgaaaaatatttgtgtttacatta 744
Query: 543 agtcacccataaatatgagaaatttatcttt 573
|||||||||||||||||||||||||||||||
Sbjct: 745 agtcacccataaatatgagaaatttatcttt 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 976
Length adjustment: 10
Effective length of query: 564
Effective length of database: 966
Effective search space: 544824
Effective search space used: 544824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_o11.g1 MSMg01no536_o11.g1 CHROMAT_FILE:
MSMg01no536_o11.g1 PHD_FILE: MSMg01no536_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:08 2005
(541 letters)
>mm_chr2_41175081_41176021
Length = 941
Score = 866 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Minus
Query: 94 tgctcagcttccttccttagagaacccaagaccaatagcccagggatggcaccactcaca 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tgctcagcttccttccttagagaacccaagaccaatagcccagggatggcaccactcaca 882
Query: 154 atgggctagggcctcccccccttgatcactaattaagaaaatgtcttacacctggatctc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 atgggctagggcctcccccccttgatcactaattaagaaaatgtcttacacctggatctc 822
Query: 214 atggaggcatttcctcaaaggaggctcctttctctgtgataactccaacttgtgtcaagt 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 atggaggcatttcctcaaaggaggctcctttctctgtgataactccaacttgtgtcaagt 762
Query: 274 tgacacacaaagcctgccagaccaacaggaaatgaagacttagaaacagaaattttgaaa 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgacacacaaagcctgccagaccaacaggaaatgaagacttagaaacagaaattttgaaa 702
Query: 334 gggaattcatctttattgttatatggttctagtttttccttccatgcttgcttgaagtag 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gggaattcatctttattgttatatggttctagtttttccttccatgcttgcttgaagtag 642
Query: 394 actgggaatagaatcataacttattttctgatttttatgcagaaaaagatcaccaggttt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 actgggaatagaatcataacttattttctgatttttatgcagaaaaagatcaccaggttt 582
Query: 454 cttaaggctatgatcaaatgtttcagtgaactgcagcctgacatttgctgttggatgttc 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cttaaggctatgatcaaatgtttcagtgaactgcagcctgacatttgctgttggatgttc 522
Query: 514 tcttctctgggaagactatttctccttc 541
||||||||||||||||||||||||||||
Sbjct: 521 tcttctctgggaagactatttctccttc 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
