Query= MSMg01no537_f02.b1 MSMg01no537_f02.b1 CHROMAT_FILE:
MSMg01no537_f02.b1 PHD_FILE: MSMg01no537_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:39 2005
(437 letters)
>mm_chr2_72719374_72720210
Length = 837
Score = 772 bits (399), Expect = 0.0
Identities = 418/433 (96%), Gaps = 14/433 (3%)
Strand = Plus / Minus
Query: 5 gaattcctaaattactagtggattctctccttccatgctgcatgccatctgtatgattca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaattcctaaattactagtggattctctccttccatgctgcatgccatctgtatgattca 411
Query: 65 cacagtagttgttttatttgagggaggaggcctttgacacagagtgtcttaaatgtcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cacagtagttgttttatttgagggaggaggcctttgacacagagtgtcttaaatgtcaaa 351
Query: 125 gcagggaaaacacctacatggtaagcattgcaaagttatgactgtcgtataaatggggta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcagggaaaacacctacatggtaagcattgcaaagttatgactgtcgtataaatggggta 291
Query: 185 aacatgtctcatttagtttgctaagcattcttccttctgagactatgttttgagaatggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aacatgtctcatttagtttgctaagcattcttccttctgagactatgttttgagaatggc 231
Query: 245 tggctgagtaatgatgcaaatagagttgcttttttggatgtatgtatgtgtgcgtgtgtg 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 230 tggctgagtaatgatgcaaatagagttgcttttttggatggatgtatgtgtgcgtgtgtg 171
Query: 305 tatgtgtatatgtatgtatgtgtgtatgtatgcatgtgtatgtatgcatgtgtgtgtata 364
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 170 tatgtgtatatgtatgtatgtgtgtatgtatgcatgtgt--------------gtgtata 125
Query: 365 tgtgcatgtattaatgtgtgtacatgtatattgtatgtacatgtatatgtatgtatatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgtgcatgtattaatgtgtgtacatgtatattgtatgtacatgtatatgtatgtatatat 65
Query: 425 gtgtatgtgtgtg 437
|||||||||||||
Sbjct: 64 gtgtatgtgtgtg 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_f02.g1 MSMg01no537_f02.g1 CHROMAT_FILE:
MSMg01no537_f02.g1 PHD_FILE: MSMg01no537_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:39 2005
(282 letters)
>mm_chr2_72532337_72533018
Length = 682
Score = 493 bits (255), Expect = e-144
Identities = 276/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Plus
Query: 1 tgggatcacaggcgtgcgccatgcccagctatgtgtttggttccaattcacatatcctga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tgggatcacaggcgtgcgccatgcccagctatgtgtttggttccaattcgcatatcctga 260
Query: 61 tcctgtggtttgagtgtggccacaaaggtttc-ctgtgttagtgcttaatcctcattgtg 119
||||||||||||||||||||| |||||||| | | |||||| |||||| |||||||||||
Sbjct: 261 tcctgtggtttgagtgtggccgcaaaggttacgc-gtgttaatgcttagtcctcattgtg 319
Query: 120 aggcactgagagggtgagagtgtcattcaccatgtgggttcacattttggtggagattag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggcactgagagggtgagagtgtcattcaccatgtgggttcacattttggtggagattag 379
Query: 180 gattaggtaaggtcctcaggatgcagggtctgaggtttttggagggaagaaaaagcgggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gattaggtaaggtcctcaggatgcagggtctgaggtttttggagggaagaaaaagcgggg 439
Query: 240 agagaaagagggagaggaggaggaagaggaaatgggggagggg 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agagaaagagggagaggaggaggaagaggaaatgggggagggg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
