TGGAGAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAATAATTCTTCACCAGGAGTCTGTCTCTCTGTGTATGTCTCTC
TTTGTGTCTCTGTGTGTGTGTCTCTGTGTGTCTCTCTGTCTCTGTCTCTC
TCACACACACACAAATAAAAATGAAGGAAAACTGTATCTAAGTCAGTGGT
GGTGCACACTATTAACCCCAGCACTTGGGAGACAGAGGAGCTCTGTGAGT
CTGAGGGCAGCCTGGTCTACATAGCAAGGTCTAGGCCAGACAAGGTTATA
CAGTAAGACCCTGTCTCAAAAAAAGATCATCATCACCAACAAAACAACAA
AAGAAACAAACCAAAGCCCTGCATCTGATGTTGGAGGGCACATGCTGAGT
GGGTAAAGTGCTTGCTGCACAACAGAACTTACGTTCACCCACATGAAAAC
CTAGCACAGAGGCACACATCTGTAACCCAGCACTGCAAGGATAGAGACAG
GTGGATTCCCAGAGCTCACTGGCCAGCCAGGTTTAGTGAGAGACCCTGCC
TTAAAAAAAAAAAGACAACCACCACCATCAGAGGAAGACATCTTATATTG
GGCATCCACACCCACGTGCACATACATACCACACACACACACACACACAC
ACACACTCACATACACACACACACACTCACACACACACTTGCTCAAAGTC
TACAGCCCATAGGAATTTCAAAGATGCTTTCCAAGTGCCTGCCACTAGCA
AATCCG

AGACAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTGGTTCCCACAGCTGGGGCTGG
AATGTAGCACTAGGACTTGTGCTCTTCTCTGTGGGGGTAACCACAGCGCC
TCATCCCAGGACTCAGGAGGACTGGCAGAGTATAAGGAATGTGGAGGTCA
CAAGCATGGGACACGATTGTGCTGATCCCTGCTAAATAAGTGACCAGTTT
TATAAAGAGCTGGCAACTTAACGTACATGTAATTCTGTGTCATTCTGCTT
ATAGCTAGGATGCTTTTGGACCTGGATAACTGGGTAACAGGCTCTGGTTA
GATTCCTGCCTGCCAGGGCTCGGGTGATGCTACCTCATGAAGGGGTTTGT
TTGAGGGGTCCTGGTGGCTGCATCCTGCTTGACCTGGCATGTTTTGGCAT
AGCATTTTGTGTCCACAGTATTCCCTACCAAGTCTGTCATACTCACAGAA
CGGAGGCTCCTACAGCTCCTCAGAGGCACCAAACCCCAGCATGGTGGATC
TCTGTTCTCAAACTGAGCTGGAAATGGACATGGCCTTGGCTGTACTTAGC
CCATGGCCCTATCAGAGTTGAGCTACTGCTTAATAACTATATATAACATC
TGTCAGAGCTGGGATGGGTGTGGCTGCTCTCATCCCAGCTAAGATGCTGG
ACTCCTTACTCATTATGTTATAGTTTCCTTGTGCATGGGAA

Query= MSMg01no537_o03.g1 MSMg01no537_o03.g1 CHROMAT_FILE:
MSMg01no537_o03.g1 PHD_FILE: MSMg01no537_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:23 2005
         (610 letters)



>mm_chr2_33174696_33175702
          Length = 1007

 Score = 1079 bits (558), Expect = 0.0
 Identities = 597/610 (97%), Gaps = 3/610 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtggttcccacagctggggctggaatgtagcactaggacttgtgctcttctctgtgggg 60
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 807 agtggctcccacagctggggctggaatgtagcactaggacttgtgctcttctctgt-ggg 749

                                                                       
Query: 61  gtaaccacagcgcctcatcccaggactcaggaggactggcagagtataaggaatgtggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtaaccacagcgcctcatcccaggactcaggaggactggcagagtataaggaatgtggag 689

                                                                       
Query: 121 gtcacaagcatgggacacgattgtgctgatccctgctaaataagtgaccagttttataaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtcacaagcatgggacacgattgtgctgatccctgctaaataagtgaccagttttataaa 629

                                                                       
Query: 181 gagctggcaacttaacgtacatgtaattctgtgtcattctgcttatagctaggatgcttt 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
Sbjct: 628 gagctggcaacttaacgtacatgtaattctgtggcattctgcttatagctaggctgctgt 569

                                                                       
Query: 241 tggacctggataactgggtaacaggctctggttagattcctgcctgccagggctcgggtg 300
           ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||
Sbjct: 568 tggacctggataactgggtgaca-gctctggttagactcctgcctgccagggctcgggtg 510

                                                                       
Query: 301 atgctacctcatgaaggggtttgtttgaggggtcctggtggctgcatcctgcttgacctg 360
           | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 509 acgctacctcatgaagggctttgtttga-gggtcctggtggctgcatcctgcttgacctg 451

                                                                       
Query: 361 gcatgttttggcatagcattttgtgtccacagtattccctaccaagtctgtcatactcac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gcatgttttggcatagcattttgtgtccacagtattccctaccaagtctgtcatactcac 391

                                                                       
Query: 421 agaacggaggctcctacagctcctcagaggcaccaaaccccagcatggtggatctctgtt 480
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 390 agaacggaggctcctacagctcctcagaggcaccagaccccagcatggtggatctctgtt 331

                                                                       
Query: 481 ctcaaactgagctggaaatggacatggccttggctgtacttagcccatggccctatcaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 330 ctcaaactgagctggaaatggacatggccttggctgtacttagcccatgaccctatcaga 271

                                                                       
Query: 541 gttgagctactgcttaataactatatataacatctgtcagagctgggatgggtgtggctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gttgagctactgcttaataactatatataacatctgtcagagctgggatgggtgtggctg 211

                     
Query: 601 ctctcatccc 610
           ||||||||||
Sbjct: 210 ctctcatccc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1007
Length adjustment: 10
Effective length of query: 600
Effective length of database: 997
Effective search space:   598200
Effective search space used:   598200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)