MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-539C03
Chromosome	2 (Build37)
Map Location	173,573,274 - 173,573,778
singlet/doublet	singlet
Overlap gene	Vapb
Upstream gene	Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik
Downstream gene	LOC620189, LOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bmp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12162 MGI:103302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Spo11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26972 MGI:1349669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rae1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66679 MGI:1913929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56190 MGI:1889294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctcfl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664799 MGI:3652571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619800 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619800 MGI:3648376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Pck1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18534 MGI:97501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58203 MGI:1927449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmepai (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65112 MGI:1929600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700021F07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72221 MGI:1919471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 2 Proteins

name	1700030G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70065 MGI:1917315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100043911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Rab22a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19334 MGI:105072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010B08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75485 MGI:1922735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs

name	Vapb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56491 MGI:1928744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC664880 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 824 ESTs pseudo : _no_value

name	LOC100043912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC664901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Stx16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228960 MGI:1923396
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npepl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228961 MGI:2448523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nespas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56802 MGI:1861674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnas (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14683 MGI:95777
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 9 mRNAs

name	Th1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57314 MGI:1926424
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctsz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64138 MGI:1891190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl30-ps5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64903 MGI:1929159
definition	note : ribosomal protein L30, pseudogene 5 pseudo : _no_value

name	Tubb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545486 MGI:107814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67126 MGI:1855697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slmo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66390 MGI:1913640
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664967 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins pseudo : _no_value

name	LOC100043757 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Bmp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982486 GeneID:12162 MGI:103302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 7 transcript_id : NM_007557.2

name	LOC100043751 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250141 GeneID:100043751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043751 transcript_id : XM_001480886.1

name	Spo11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755623 GeneID:26972 MGI:1349669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae) transcript_id : NM_012046.1

name	Rae1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803370 GeneID:66679 MGI:1913929
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAE1 RNA export 1 homolog (S. pombe) transcript_id : NM_175112.3

name	Rbm38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053932 GeneID:56190 MGI:1889294
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 38 transcript_id : NM_019547.2

name	Ctcfl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487068 GeneID:664799 MGI:3652571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCCTC-binding factor (zinc finger protein)-like transcript_id : NM_001081387.1

name	EG619800 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82887848 GeneID:619800 MGI:3648376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG619800 transcript_id : XM_884173.1

name	Pck1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130217 GeneID:18534 MGI:97501
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoenolpyruvate carboxykinase 1, cytosolic transcript_id : NM_011044.2

name	Zbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11496252 GeneID:58203 MGI:1927449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Z-DNA binding protein 1 transcript_id : NM_021394.1

name	Tmepai (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508427 GeneID:65112 MGI:1929600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane, prostate androgen induced RNA transcript_id : NM_022995.3

name	1700021F07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367655 GeneID:72221 MGI:1919471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 2 Proteins product : RIKEN cDNA 1700021F07 gene transcript_id : XM_884453.2

name	1700030G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367656 GeneID:70065 MGI:1917315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 1700030G11 gene transcript_id : XM_130735.7

name	LOC100043911 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250266 GeneID:100043911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043911 transcript_id : XM_001481221.1

name	Rab22a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343832 GeneID:19334 MGI:105072
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB22A, member RAS oncogene family transcript_id : NM_024436.2

name	1700010B08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250268 GeneID:75485 MGI:1922735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs product : RIKEN cDNA 1700010B08 gene transcript_id : XM_001481222.1

name	Vapb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86476057 GeneID:56491 MGI:1928744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle-associated membrane protein, associated protein B and C transcript_id : NM_019806.5

name	Stx16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360172 GeneID:228960 MGI:1923396
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntaxin 16 transcript_id : NM_172675.2

name	Npepl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47523980 GeneID:228961 MGI:2448523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminopeptidase-like 1 transcript_id : NM_213733.1

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959902 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_022000.2

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959891 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_019690.2

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959906 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_010309.3

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959920 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_001077507.1

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959925 GeneID:14683 MGI:95777
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_201617.1

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959932 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NR_003258.1

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959929 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_201616.1

name	Gnas (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117959927 GeneID:14683 MGI:95777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus transcript_id : NM_001077510.1

name	Th1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91982764 GeneID:57314 MGI:1926424
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TH1-like homolog (Drosophila) transcript_id : NM_020580.2

name	Ctsz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892749 GeneID:64138 MGI:1891190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin Z transcript_id : NM_022325.4

name	Tubb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430499 GeneID:545486 MGI:107814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, beta 1 transcript_id : NM_001080971.1

name	Atp5e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158704 GeneID:67126 MGI:1855697
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit transcript_id : NM_025983.3

name	Slmo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981271 GeneID:66390 MGI:1913640
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : slowmo homolog 2 (Drosophila) transcript_id : NM_025531.2

name	LOC100043757 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250144 GeneID:100043757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to likely orthologue of H. sapiens chromosome 20 open reading frame 174 (C20orf174) transcript_id : XM_001480903.1

name	Bmp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982487 CCDS:CCDS17136.1 GeneID:12162 MGI:103302
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence TAS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0051216 - cartilage development [Evidence IEA]; GO:0048468 - cell development [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0048595 - eye morphogenesis (sensu Mammalia) [Evidence IMP]; GO:0040007 - growth [Evidence IEA]; GO:0001822 - kidney development [Evidence IMP]; GO:0001707 - mesoderm formation [Evidence IGI]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0045597 - positive regulation of cell differentiation [Evidence IDA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0035239 - tube morphogenesis [Evidence IDA] codon_start : 1 note : osteogenic protein 1 product : bone morphogenetic protein 7 protein_id : NP_031583.2

name	LOC100043751 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250142 GeneID:100043751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480936.1

name	Spo11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755624 CCDS:CCDS17137.1 GeneID:26972 MGI:1349669
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007131 - meiotic recombination [Evidence IEA]; GO:0001541 - ovarian follicle development [Evidence IMP] codon_start : 1 function : believed to initiate meiotic recombination through formation of a covalent protein-DNA intermediate resulting in a double strand break note : sporulation protein, meiosis-specific, SPO11 homolog (S. cervisiae) product : sporulation protein, meiosis-specific, SPO11 homolog protein_id : NP_036176.1

name	Rae1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201956 CCDS:CCDS17138.1 GeneID:66679 MGI:1913929
definition	codon_start : 1 product : RAE1 RNA export 1 homolog protein_id : NP_780321.1

name	Rbm38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053933 CCDS:CCDS17139.1 GeneID:56190 MGI:1889294
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : seb4 mRNA; RNA-binding region (RNP1, RRM) containing 1; seb4-like product : seb4 protein_id : NP_062420.2

name	Ctcfl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487069 GeneID:664799 MGI:3652571
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : BORIS; likely orthologue of H. sapiens CCCTC-binding factor-like protein (CTCFL) product : CCCTC-binding factor (zinc finger protein)-like protein_id : NP_001074856.1

name	EG619800 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887849 GeneID:619800 MGI:3648376
definition	codon_start : 1 product : similar to ubiquitin A-52 residue ribosomal protein fusion product 1 protein_id : XP_889266.1

name	Pck1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110683 CCDS:CCDS17141.1 GeneID:18534 MGI:97501
definition	GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004613 - phosphoenolpyruvate carboxykinase (GTP) activity [Evidence IEA]; GO:0004611 - phosphoenolpyruvate carboxykinase activity [Evidence IMP] GO_process : GO:0006094 - gluconeogenesis [Evidence IDA]; GO:0046327 - glycerol biosynthesis from pyruvate [Evidence IMP]; GO:0006629 - lipid metabolism [Evidence IMP] codon_start : 1 product : phosphoenolpyruvate carboxykinase 1, cytosolic protein_id : NP_035174.1

name	Zbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11496253 CCDS:CCDS17142.1 GeneID:58203 MGI:1927449
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003726 - double-stranded RNA adenosine deaminase activity [Evidence IEA]; GO:0003692 - left-handed Z-DNA binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : tumor stroma and activated macrophage protein DLM-1 product : Z-DNA binding protein 1 protein_id : NP_067369.1

name	Tmepai (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508428 GeneID:65112 MGI:1929600
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence ISS]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Nedd4 WW binding protein 4 product : transmembrane prostate androgen-induced protein protein_id : NP_075371.2

name	1700021F07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887863 GeneID:72221 MGI:1919471
definition	codon_start : 1 product : hypothetical protein LOC72221 protein_id : XP_889546.1

name	1700030G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367657 GeneID:70065 MGI:1917315
definition	codon_start : 1 product : hypothetical protein LOC70065 protein_id : XP_130735.6

name	LOC100043911 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250267 GeneID:100043911
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481271.1

name	Rab22a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21426817 GeneID:19334 MGI:105072
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : RAB22, member RAS oncogene family product : RAB22A, member RAS oncogene family protein_id : NP_077756.1

name	1700010B08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250269 GeneID:75485 MGI:1922735
definition	codon_start : 1 product : hypothetical protein LOC75485 protein_id : XP_001481272.1

name	Vapb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543940 CCDS:CCDS17146.1 GeneID:56491 MGI:1928744
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : VAMP-associated protein 33b product : vesicle-associated membrane protein, associated protein B and C protein_id : NP_062780.2

name	Stx16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789393 CCDS:CCDS17147.1 GeneID:228960 MGI:1923396
definition	codon_start : 1 product : syntaxin 16 protein_id : NP_766263.1

name	Npepl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47523981 CCDS:CCDS17148.1 GeneID:228961 MGI:2448523
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004178 - leucyl aminopeptidase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : aminopeptidase-like 1 protein_id : NP_998898.1

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959892 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 4; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform c protein_id : NP_062664.2

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959903 CCDS:CCDS17149.1 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform c protein_id : NP_068840.2

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271396 CCDS:CCDS17151.1 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform a protein_id : NP_034439.2

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959921 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform f is encoded by transcript variant 5; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform f protein_id : NP_001070975.1

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959926 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 6; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform d protein_id : NP_963911.1

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959930 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform h is encoded by transcript variant 7; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform h protein_id : NP_963910.1

name	Gnas (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117959928 GeneID:14683 MGI:95777
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence ISS] [Evidence TAS]; GO:0005624 - membrane fraction [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP] [Evidence IDA]; GO:0042493 - response to drug [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform g is encoded by transcript variant 8; Gs alpha subunit; stimulatory G-protein alpha subunit product : GNAS complex locus isoform g protein_id : NP_001070978.1

name	Th1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91982765 GeneID:57314 MGI:1926424
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : TH1 homolog protein_id : NP_065605.2

name	Ctsz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11968166 CCDS:CCDS17152.1 GeneID:64138 MGI:1891190
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : cathepsin X; cathepsin Z product : cathepsin Z preproprotein protein_id : NP_071720.1

name	Tubb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430500 GeneID:545486 MGI:107814
definition	codon_start : 1 product : tubulin, beta 1 protein_id : NP_001074440.1

name	Atp5e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385484 GeneID:67126 MGI:1855697
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005753 - proton-transporting ATP synthase complex (sensu Eukaryota) [Evidence ISS]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence ISS]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence ISS] [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATP synthase epsilon chain, mitochondrial product : ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit protein_id : NP_080259.1

name	Slmo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384954 CCDS:CCDS17155.1 GeneID:66390 MGI:1913640
definition	codon_start : 1 note : likely orthologue of H. sapiens chromosome 20 open reading frame 45 (C20orf45) product : slowmo homolog 2 protein_id : NP_079807.1

name	LOC100043757 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250145 GeneID:100043757
definition	codon_start : 1 product : similar to likely orthologue of H. sapiens chromosome 20 open reading frame 174 (C20orf174) protein_id : XP_001480953.1

name	LOC620189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620189
definition	number : 4 pseudo : _no_value

name	LOC620189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620189
definition	number : 3 pseudo : _no_value

name	LOC620189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620189
definition	number : 2 pseudo : _no_value

name	LOC620189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620189
definition	number : 1 pseudo : _no_value

name	LOC100043912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043912
definition	number : 1 pseudo : _no_value

name	LOC664967 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664967
definition	number : 1 pseudo : _no_value

name	LOC664967 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664967
definition	number : 2 pseudo : _no_value

name	LOC664880 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250270 GeneID:664880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 824 ESTs product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_035052.1

name	LOC664901 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250271 GeneID:664901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to synaptobrevin like protein 1B pseudo : _no_value transcript_id : XR_035053.1

name	Nespas (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:141802301 GeneID:56802 MGI:1861674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroendocrine secretory protein antisense transcript_id : NR_002846.2

clone name	MSMg01-344K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091N15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-094K03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-454H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278J07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-109H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330L12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-325B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235N01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-539C03.T7 (MSMg01no539_c03.b1)	MSMg01-539C03.TJ (MSMg01no539_c03.g1)
ACC	AG605697	AG605698
length	736	725
length of high quality (start - end)	376 (75 - 450)	506 (82 - 587)
definition	CHROMAT_FILE: MSMg01no539_c03.b1 PHD_FILE: MSMg01no539_c03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:17:58 2005	CHROMAT_FILE: MSMg01no539_c03.g1 PHD_FILE: MSMg01no539_c03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:17:58 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTCTTTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GNGNGGAATTCTTGCCTGACCAATATCGAGTGGCTGAAAAGCACCTGAAA ATATGGTCAGCATTCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT GAGATTCCACCTCACACCAGTCAGAATGGTTAAGATCAAAAATTTAGGTG ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT TGGTTGGGTTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTT CCTCAGAAAATTGGACATAGTACTACCAGAGGATACCGCAATACCTCTCC TGGGCATATATCCAGAAGATGTTCCAACCGGTAAGAAGGACACATGCTCC ACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAGGCTGGAAAGAACC CAGATATCCCCTCAACAGAGAAATGGATACTGATTATGTGGGACATTTAC ACAAATCAAGTACTACTCCGCTTTTTAAAAAGAATGAATTTTTTGAAATT CCCAAGGCAAAAGGAATGGGACCTGGGAGGGTTATCCCCCGGGATGGAAG TTAACCCCACTCTCAAAAAAAAACCCCCCCTGGGAAGTGTCCCCCCCCGG GTAAAATGGGATATTTTTTTCTCACAAAAATTTCTAAATATCCCCCTTCA TACGCTGAGCTATTTCTTTTTTTGTTCAACCACACC	CTTCCCTCACAGCTTTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATAACCCTTCCTAAAATA GAAGATGTTTGAGCAGAGCCTTGAAGAATGAGCATACTTCCCAAAGCAGA GGAGGGCCCTGGTTCTTCAGTAATAGGGAAACCAGACTAGAATCCACCCT AACCAACCAGCTACATGCTGCCCTTTTTCCCATTGGTGAAATGAGAAAGC CAGTTGAGCAGAGACACAGAAGGCCAGACATATCTTCCATGGTCTGTGTT GTCTGTAGCTAAGAGGGGCAACTTTGGGGAATCCTGTAGCTTGAGAGATT AAAACTACCATGAGCCATTATTTGTATTGCAGTAGCTGCAACCTAGAGAA GTTGGGGCCCTTGATTAGGGTCACTCCAGCCCCTAGGCTGGGTGTCTCTC AGCTGGCTCCTCTGTGCACTTAGACTGTGTTTAGGGGAAGTGGCTTGCTC TATATGTTCACAGTGACCATGAATTTTGGTCTTTTATGTAGAGAAAAATT ACTAGGTGTTTGTTAGCTGATGGGGTGAAGAATATGTACAGAATAACTTG TCTTTTGAAGATTTTTGGGGGATGGATATATAGGATTCATCTTGCATTTT GGTCTGTCCCGCCGGATATCCTAAGGAAGTGTAAAGGGCTGTGCCGTTTG TCTTCAGTCGGTTTTCTATCTAGCA
quality values	Open. Hide. 9 9 9 10 15 14 8 6 6 6 6 8 12 22 13 10 9 9 9 9 13 15 27 19 18 17 21 16 22 18 32 17 17 19 23 21 11 12 12 24 15 11 11 10 11 11 13 12 12 9 3 0 3 0 3 17 19 23 25 28 28 35 25 18 9 9 6 6 6 6 7 8 11 11 14 20 31 39 43 48 43 53 57 59 48 57 48 57 48 57 57 57 57 48 48 48 48 42 36 36 48 48 48 50 53 47 47 43 43 50 54 54 57 57 57 59 54 54 48 48 43 43 43 46 44 47 47 47 41 41 41 50 50 47 57 47 47 46 44 40 57 57 57 57 57 57 57 68 68 50 50 42 42 38 42 42 50 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 57 57 57 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 44 43 35 47 47 57 57 68 68 68 68 68 68 57 57 57 57 52 52 38 38 32 42 38 33 29 33 43 50 57 57 57 57 57 57 52 52 52 52 47 57 57 57 57 57 57 57 57 59 59 59 68 59 59 57 59 59 59 57 48 39 37 37 39 39 57 57 57 57 57 48 48 48 57 57 57 57 42 39 37 37 41 47 48 57 54 48 48 48 48 48 59 59 59 59 57 57 54 54 54 57 57 57 57 57 57 43 43 43 43 43 48 48 48 48 57 57 57 57 42 47 47 50 47 47 39 34 28 24 24 24 24 25 28 29 31 35 43 39 39 37 37 39 28 24 17 17 16 17 17 14 14 13 13 14 14 14 24 21 32 32 35 32 32 30 30 31 25 24 16 16 13 17 11 11 11 9 9 9 9 9 9 9 9 17 12 12 11 11 10 10 16 19 20 22 11 11 8 10 10 12 10 9 9 9 9 9 13 12 10 11 11 18 11 11 11 11 11 12 13 13 14 16 18 19 8 8 8 8 11 11 11 13 15 19 19 30 34 34 24 13 11 10 10 11 19 19 13 11 11 8 8 8 9 9 9 10 14 13 11 11 10 10 10 10 9 10 9 9 9 11 12 15 8 8 8 6 6 7 6 8 8 10 8 8 10 10 10 8 8 8 8 8 8 10 10 8 8 8 8 10 8 10 9 12 10 9 9 9 9 9 8 8 8 8 13 10 18 9 9 9 14 14 13 24 10 9 9 9 8 6 6 6 8 6 10 10 10 12 15 10 12 9 7 6 6 6 6 6 8 8 8 8 8 9 8 9 8 8 8 8 9 11 11 9 11 11 14 15 15 11 11 11 12 17 16 11 11 12 14 10 10 10 13 13 10 10 10 10 10 17 12 9 8 8 6 8 8 8 8 8 6 6 6 6 8 6 6 8 8 8 10 12 16 24 26 26 23 23 12 9 7 7 8 8 9 9 9 8 9 8 8 8 8	Open. Hide. 8 8 8 8 10 11 9 8 6 6 6 8 8 8 8 8 10 8 8 9 9 9 12 11 17 21 17 29 30 37 37 47 47 25 21 9 10 10 10 9 9 9 10 10 10 10 10 26 22 37 33 37 44 44 44 39 37 37 39 37 47 33 23 10 9 10 10 10 11 11 11 21 23 39 39 31 31 31 31 33 33 36 36 39 39 57 48 48 43 43 48 48 43 43 59 57 57 53 53 54 54 57 50 50 68 68 68 68 68 68 59 54 54 54 54 54 46 46 43 43 46 57 44 44 57 41 47 47 50 50 47 57 57 57 57 48 46 48 48 44 44 44 46 57 57 57 57 57 57 57 68 68 68 68 57 57 43 43 50 50 59 59 57 48 57 57 52 43 43 50 50 68 68 68 68 68 68 68 57 57 57 52 52 52 57 57 57 57 59 57 57 57 43 43 37 43 35 43 43 57 57 57 52 52 43 43 39 39 39 57 57 57 57 57 57 57 57 57 59 59 57 57 57 59 59 59 59 57 57 57 57 52 54 57 59 59 59 59 57 57 57 57 57 68 68 68 62 62 62 52 52 52 47 47 41 43 43 43 43 62 62 62 62 62 62 52 52 52 52 52 52 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 38 34 17 26 24 34 26 12 11 13 21 29 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 52 52 62 57 57 39 39 39 57 57 59 59 59 59 59 57 57 57 59 59 59 59 59 47 59 35 39 39 43 44 57 47 59 43 43 43 44 44 59 59 57 57 52 52 52 57 57 57 52 52 52 57 59 57 57 68 57 57 57 57 57 59 52 52 57 57 57 57 52 44 38 28 20 28 24 38 38 32 23 27 27 38 38 50 50 50 43 43 50 57 57 50 37 43 43 59 59 32 32 13 24 24 44 44 57 57 57 57 57 57 57 44 44 26 26 26 37 36 32 32 36 36 43 59 59 57 47 46 41 37 37 32 30 36 30 44 44 57 34 37 23 23 23 32 29 24 21 9 9 9 19 23 43 43 43 43 39 39 36 35 35 39 37 50 47 47 34 34 34 39 36 39 43 41 32 29 27 24 26 15 12 12 16 18 26 24 25 34 34 48 57 39 36 32 32 32 34 39 43 43 37 42 39 35 35 23 24 19 19 14 19 19 16 10 10 14 23 24 32 33 37 33 37 37 28 21 10 10 9 9 9 12 10 10 8 8 8 15 15 25 22 18 18 14 18 21 29 30 28 33 31 31 16 16 11 11 16 19 37 37 28 19 14 12 12 10 12 14 12 12 11 11 11 21 22 34 30 21 16 12 11 11 11 16 18 16 20 22 23 28 24 23 28 28 30 24 24 18 14 11 11 8 8 8 10 11 16 10 15 15 9 9 9 16 13 15 14 12 12 8 8 8 10 10 8 10 11 11 12 12 13 13 14 16 16 12 9 9 10 10 10 15 10 10 10 10 10 8 8 8 8 8 10 19 21 29 12 12 11 15 9 9 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no539_c03.g1 MSMg01no539_c03.g1 CHROMAT_FILE:
MSMg01no539_c03.g1 PHD_FILE: MSMg01no539_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:58 2005
         (506 letters)



>mm_chr2_173573074_173573979
          Length = 906

 Score =  946 bits (489), Expect = 0.0
 Identities = 501/505 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataacccttcctaaaatagaagatgtttgagcagagccttgaagaatgagcatacttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataacccttcctaaaatagaagatgtttgagcagagccttgaagaatgagcatacttcc 260

                                                                       
Query: 61  caaagcagaggagggccctggttcttcagtaatagggaaaccagactagaatccacccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagcagaggagggccctggttcttcagtaatagggaaaccagactagaatccacccta 320

                                                                       
Query: 121 accaaccagctacatgctgccctttttcccattggtgaaatgagaaagccagttgagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaccagctacatgctgccctttttcccattggtgaaatgagaaagccagttgagcag 380

                                                                       
Query: 181 agacacagaaggccagacatatcttccatggtctgtgttgtctgtagctaagaggggcaa 240
           ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 agatacagaaggccagacatatcttccatggtctgtgttgtctgtagctaagtggggcaa 440

                                                                       
Query: 241 ctttggggaatcctgtagcttgagagattaaaactaccatgagccattatttgtattgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttggggaatcctgtagcttgagagattaaaactaccatgagccattatttgtattgca 500

                                                                       
Query: 301 gtagctgcaacctagagaagttggggcccttgattagggtcactccagcccctaggctgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtagctgcaacctagagaagttggggcccttgattagggtcactccagcccctaggctgg 560

                                                                       
Query: 361 gtgtctctcagctggctcctctgtgcacttagactgtgtttaggggaagtggcttgctct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtctctcagctggctcctctgtgcacttagactgtgtttaggggaagtggcttgctct 620

                                                                       
Query: 421 atatgttcacagtgaccatgaattttggtcttttatgtagagaaaaattactaggtgttt 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatggtcacagtgaccatgaattttggtcttttatgtagagaaaaattactaggtgttt 680

                                    
Query: 481 gttagctgatggggtgaagaatatg 505
           ||||| |||||||||||||||||||
Sbjct: 681 gttagttgatggggtgaagaatatg 705


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information