Query= MSMg01no539_e17.b1 MSMg01no539_e17.b1 CHROMAT_FILE:
MSMg01no539_e17.b1 PHD_FILE: MSMg01no539_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:12 2005
(613 letters)
>mm_chr2_84691825_84692837
Length = 1013
Score = 1135 bits (587), Expect = 0.0
Identities = 605/611 (99%), Gaps = 2/611 (0%)
Strand = Plus / Plus
Query: 4 ggaattcattactgttctg-attcgggcctgctttgcctgtcagagccacctcagtttca 62
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattactggt-tgcattcgggcctgctttgcctgtcagagccacctcagtttca 262
Query: 63 ttcttacctgcccgctctttcctgtgatttatccctgttcggcagaacctgtaggctatg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcttacctgcccgctctttcctgtgatttatccctgttcggcagaacctgtaggctatg 322
Query: 123 gtatttgggcctcagagaagattaaaggtcacctttgttttagagggttctccacagcta 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtatttgggcctcagagaagattaaaggtcacctttgttttagagggttctccacagctg 382
Query: 183 caaccttgatggggccaggaggaagtctttaaggttgcgaacatgagtggttttctttcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caaccttgatggggccaggaggaagtctttaaggttgcgaacatgagtggttttctttcc 442
Query: 243 ttcacagttttagcgttctcactttggaaatgagttggactacgtcagtgttttttattt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcacagttttagcgttctcactttggaaatgagttggactacgtcagtgttttttattt 502
Query: 303 ttattttctatttatgttatacatatgcgtgttttgtctgcacgtatgtcggtgtatcgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttattttctatttatgttatacatatgcgtgttttgtctgcacgtatgtcggtgtatcgt 562
Query: 363 gtgcatgcctgtttccctgcagaggctagaaaaggctgacaggaactagagttataaaca 422
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 563 gtgcatgcctgtttccctgcagaggctagaaaaggctgacagaaactagagttataaaca 622
Query: 423 gttttgagaaaccgtggtgctggacattgagcatctgtgagctctcctgtccctagatca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gttttgagaaaccgtggtgctggacattgagcatctgtgagctctcctgtccctagatca 682
Query: 483 gtgtttcttaacacctattccagcattgtaaaaaacccaggtagccttgggatgaggcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtgtttcttaacacctattccagcattgtaaaaaacccaggtagccttgggatgaggcaa 742
Query: 543 agttaaaacttctctctaaggatatttctggaacactgttaggtgcccaagtgcattgag 602
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 743 agttaaaacttctctctaaggatatttctggaacactgtttggtgcccaagtgcattgag 802
Query: 603 tgtgtgataga 613
|||||||||||
Sbjct: 803 tgtgtgataga 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_e17.g1 MSMg01no539_e17.g1 CHROMAT_FILE:
MSMg01no539_e17.g1 PHD_FILE: MSMg01no539_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:12 2005
(649 letters)
>mm_chr2_84843638_84844686
Length = 1049
Score = 1193 bits (617), Expect = 0.0
Identities = 641/649 (98%)
Strand = Plus / Minus
Query: 1 tcccattgtatgagaacatagaatttagaagggttctgagatcttgtaccaggatgcctg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 849 tcccattgtatgagaacatagaatttagaaggattctgagatcttgtaccaggatgcctg 790
Query: 61 tatccttaacagctagctaaagacagatggttcagagattccaagtttgggctgtggagt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tacccttaacagctagctaaagacagatggttcagagattccaagtttgggctgtggagt 730
Query: 121 catagaatcagaagtcatcagactgaagcaagtcacctgctcttctctctccaaacctat 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 729 catagaatcagaagtcatcagactcaagcaagtcacctgctcttctctctccaaacctat 670
Query: 181 aaaatgggtcaacaatagtgcattattcatgaggttaactgaggtactctgcatatattt 240
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 669 aaaatgggtcaataatagtgcattattcatgaggttaactgaggtaatctgcatatattt 610
Query: 241 gtgggtctctatatttagtgggtactgagatggtcatgacctgttcagaccctcaagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gtgggtctctatatttagtgggtactgagatggtcatgacctgttcagaccctcaagcta 550
Query: 301 gcctgagagccacaggtttctaaaatcttctacccatctcaaatacttcttttcctaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcctgagagccacaggtttctaaaatcttctacccatctcaaatacttcttttcctaact 490
Query: 361 tcttcaagatctccctggaggtctccttggaatcccaggttcttgtgtctcatcacggac 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 489 tcttcaagatctccctggaggtctccttggaatcccgggttcttgtgtctcatcacggac 430
Query: 421 ataaaaacagtccccttccttttgtccatttcatcatcctcctgctgctttggagtggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ataaaaacagtccccttccttttgtccatttcatcatcctcctgctgctttggagtggaa 370
Query: 481 ttcattctgctttgccttgacctgtgaagcacgctcccaccattacccagtgggagacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttcattctgctttgccttgacctgtgaagcacgctcccaccattacccagtgggagacat 310
Query: 541 agcgtgccagagttgcccagacataacttaccaaagttaaagatggccttgttcctcaca 600
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aacatgccagagttgcccagacataacttaccaaagttaaagatggccttgttcctcaca 250
Query: 601 ccctttccctgacctccaggccctccttccagctcagtggctctgcttc 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccctttccctgacctccaggccctccttccagctcagtggctctgcttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
