NNNTTACTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTAGGACATGATGAATATCAAACTGATACAGGCCTGGAAG
CTTCATTCCAACTATTTAGCCCTCAGGGTGCTTATAGGCTCTATATGTGA
TCACAGGGAGAAAAACATAACAATCTTACCCAAAAGTGAATTCTACACCC
TATAATAATGACTGTCCTGCTAAGACATGCCACTTGTACAGTAGTGGCAT
TTTCTGATTATATTTAAAAACTTTGCCAACGGTGGGACTCATTACTGGTA
CTGTAAACTTGGAAAAAAGTCAATGAATGGTTAGGTCATAAGCCTTAGGG
TAGAGCATAATACAAGTGTTCTGGTAAATGGGTATAGTATTAAATTGCCT
TTTCAACTATTATTCTTATGTCCATACATTATTGCATCTCTCAGTTGTTA
TCAGAGAAGCTTCTTTTTGCAGAGAAATTTTAATCCAGCAACATGGCTAC
TCTGGCAGGAGTACAGACATGCCTTTAGTACACACCTTTAATCCAAAACA
ATGAAAATCAGGTTATCTTACAGAAAGAACCAGGTATGTTTGAAAGTGAC
TTCTAATTGAACAGCAGACAACGTGACAAATCAAAAGGGTACACTCAACT
CTCAAAAACACAGCACAAGAAATGGAGGCTGTTTAAGAGCAGTGCAGGAA
GAGAGAGAAGACGTCCAGTTCTGGGCTCAATTTATTCAGTCATTTGCGAG
TCAGTGCAGTAAGTG

TTTTTTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGTTCTCAGGTTATAG
CATTGTGGGGAATTGTAATAAAACTAGAAGACTCACTTCTTTCTTTAAAA
TCTCATTATACAGTGTGGATAGTGGAGCAAAACAAAGGACAGGATGTCAT
CTAGTCAATAGAACAATGGAAAAAGCCTTATACCAGACCCAAGAGAGTAG
ATTTTCTATTGTTTCATTAACTAGAGATAGAACATGGCACAAGCCAATAA
ACATTCTCTTTCTCAGTTTCCTCGTCTGAAAAACAAAAAATTTACTTCCA
TCATTCCATTGGCATTTACAACTTCTATTTGAAACTGTGATTTTAATATG
ACATTCTTAAATATAGAAAAATTTACTTAAGCTTAAATATTATCATTTAT
ATTTAAGTTGTGTGGTACTAAAATATAAATAATATTATCTTGTAGAAAAC
TTCTTCAATAAATCAGTATATAATAACCAAGTTTAGAGCAAGGTTTTATT
ACCCCGTACTACATCTAAACCTAGCGGCAATACCTGTACCATAAGTTATA
GGTTAAAAATAATCCCCATGAATAACAATCTTTGACTAGGCACACAGTAG
CTACATTAAGAAAGAGCAAGATAGAGTTTTAGTAATCACTTACTTTTCTT
CCAAATCCCAGAAGGCACTGTAGGGAAGGAGGGGTGAGACAACACCTACC
A

Query= MSMg01no541_j11.g1 MSMg01no541_j11.g1 CHROMAT_FILE:
MSMg01no541_j11.g1 PHD_FILE: MSMg01no541_j11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:18 2005
         (641 letters)



>mm_chr2_81294209_81295249
          Length = 1041

 Score = 1185 bits (613), Expect = 0.0
 Identities = 634/641 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttagttctcaggttatagcattgtggggaattgtaataaaactagaagactcacttcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagttctcaggttatagcattgtggggaattgtaataaaactagaagactcacttcttt 260

                                                                       
Query: 61  ctttaaaatctcattatacagtgtggatagtggagcaaaacaaaggacaggatgtcatct 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 261 ctttaaaatctcattatacagtgtggatcgtggagcaaaacaaaggacaggatgttatct 320

                                                                       
Query: 121 agtcaatagaacaatggaaaaagccttataccagacccaagagagtagattttctattgt 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccaatagaacaatggaaaaagccttataccagacccaagagagtagattttctattgt 380

                                                                       
Query: 181 ttcattaactagagatagaacatggcacaagccaataaacattctctttctcagtttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcattaactagagatagaacatggcacaagccaataaacattctctttctcagtttcct 440

                                                                       
Query: 241 cgtctgaaaaacaaaaaatttacttccatcattccattggcatttacaacttctatttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtctgaaaaacaaaaaatttacttccatcattccattggcatttacaacttctatttga 500

                                                                       
Query: 301 aactgtgattttaatatgacattcttaaatatagaaaaatttacttaagcttaaatatta 360
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 501 aactgtgattttaatatgacattcttaaataaagaaaaatttacttaaacttaaatatta 560

                                                                       
Query: 361 tcatttatatttaagttgtgtggtactaaaatataaataatattatcttgtagaaaactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatttatatttaagttgtgtggtactaaaatataaataatattatcttgtagaaaactt 620

                                                                       
Query: 421 cttcaataaatcagtatataataaccaagtttagagcaaggttttattaccccgtactac 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 cttcaataaatcagtatataataaccaagtttagagcaagattttattaccccgtactac 680

                                                                       
Query: 481 atctaaacctagcggcaatacctgtaccataagttataggttaaaaataatccccatgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atctaaacctagcggcaatacctgtaccataagttataggttaaaaataatccccatgaa 740

                                                                       
Query: 541 taacaatctttgactaggcacacagtagctacattaagaaagagcaagatagagttttag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taacaatctttgactaggcacacagtagctacattaagaaagagcaagatagagttttag 800

                                                    
Query: 601 taatcacttacttttcttccaaatcccagaaggcactgtag 641
           |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 801 taatcacttacttttcttccaaatcccagaaggcgctgtag 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)