Query= MSMg01no541_p19.b1 MSMg01no541_p19.b1 CHROMAT_FILE:
MSMg01no541_p19.b1 PHD_FILE: MSMg01no541_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:51 2005
(682 letters)
>mm_chr2_43493777_43494858
Length = 1082
Score = 1259 bits (651), Expect = 0.0
Identities = 671/678 (98%)
Strand = Plus / Plus
Query: 5 gaattcccctgtccaaaaacttggtctaactgcttctaagggggaataacttcatttgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccctgtccaaaaacttggtctaactgcttctaagggggaataacttcatttgat 264
Query: 65 atctgtgtacatatattatatatgactttctaagcaaatataaaataatatgaaagtagt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctgtgtacatatattatatatgactttctaagcaaatataaaataatatgaaagtagt 324
Query: 125 actttaaatttcaaaggcttagcaatcacaatatgtgacaaacagcactcaaatgacctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actttaaatttcaaaggcttagcaatcacaatatgtgacaaacagcactcaaatgacctt 384
Query: 185 gactttgtgttagctttacaaatgtcaacgattatatttcatgtggtccagtatcatgtt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacttcgtgttagctttacaaatgtcaacgattatatttcatgtggtccagtatcatgtt 444
Query: 245 tgtccctttgatttaagaacttcaatatgtgagatgttttttctgcaggactccttaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtccctttgatttaagaacttcaatatgtgagatgttttttctgcaggactccttaagc 504
Query: 305 tgtaattcaatattcagccacaacctgctttaataaaaatggatatctgctttgagaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtaattcaatattcagccacaacctgctttaataaaaatggatatctgctttgagaatt 564
Query: 365 ggaatggatcagatgtgcagaaagatgatttctgttcacaattttaatgttattcaggga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggaatggatcagatgtgcagaaagatgatttctgttcacaattttaatgttattcaggga 624
Query: 425 caccatgatactcaatggtgttgctgcctacttgcaacaggttcaacatagcttcaatgc 484
||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 625 caccatggtactcaatggtgttgctgcttacttgcaacaggtgcaacatagcttcaatgc 684
Query: 485 ttccattgtgtaaagttctactcccattgctgatagtttgaggacatgttaagtggccaa 544
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttccattgtgcaaagttctactcccattgctgatagtttgaggacatgttaagtggccaa 744
Query: 545 gaatgatgcctattgataattttgataaaaattctctaatttttattcatacaaacacat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaatgatgcctattgataattttgataaaaattctctaatttttattcatacaaacacat 804
Query: 605 ctttttggaaccacttagagtcctttgattgaaattttnaaatagagatgacataaaggg 664
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 805 ctttttggaaccacttagagtcctttgattgaaattttaaaatagagatgacataaaggg 864
Query: 665 ttttgtcataattattat 682
||||||||||||||||||
Sbjct: 865 ttttgtcataattattat 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_p19.g1 MSMg01no541_p19.g1 CHROMAT_FILE:
MSMg01no541_p19.g1 PHD_FILE: MSMg01no541_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:52 2005
(680 letters)
>mm_chr2_43653798_43654878
Length = 1081
Score = 1278 bits (661), Expect = 0.0
Identities = 676/681 (99%), Gaps = 1/681 (0%)
Strand = Plus / Minus
Query: 1 agccctggagaatagaactgggaaagaccttttggaaagcaactaattttacatattcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 agccctggagaatagaactgggaaagaccttttggaaagcaactaattttacatattcca 755
Query: 61 ttatcctataatgttccttgtgggattttctttgctttaagtggattaaatcaaatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttatcctataatgttccttgtgggattttctttgctttaagtggattaaatcaaatatac 695
Query: 121 agttgatgtttttgtgtgctttgctcctgaggtataacaactcccatacagaagtcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 agttgatgtttttgtgtgctttgctcctgaggtataacaactcccatacagaagtcataa 635
Query: 181 acaacttcgtctagagtctattatccatctaccaaggacacaatatgctactaacctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 acaacttcgtctagagtctattatccatctaccaaggacacaatatgctactaacctttt 575
Query: 241 ctggttaacagaatttatcattttattgtggacccaactgagagtgaaaagaaaagtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctggttaacagaatttatcattttattgtggacccaactgagagtgaaaagaaaagtggt 515
Query: 301 ttggaaaatatccattcagctctcttcagacaagatgaggagatattgctatgtgcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttggaaaatatccattcagctctcttcagacaagatgaggagatattgctatgtgcctta 455
Query: 361 tctctggaatctgtgggtagcttgttttacctctactttgacttacgctctttgattctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tctctggaatctgtgggtagcttgttttacctctactttgacttacgctctttgattctc 395
Query: 421 tttgaacattcatttgcatattctatccagatgtcatttttttt-ccagtcagtttggac 479
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 394 tttgaacattcatttgcatattctatccaggtgtcatttttttttccagtcagtttggac 335
Query: 480 atattctcatcctactgatattgtgatgagaaatagagtctcttgaacaagaattggtac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atattctcatcctactgatattgtgatgagaaatagagtctcttgaacaagaattggtac 275
Query: 540 tttctacggaaaagttagaagttttgagttttcctgtcacaaataagatttaaaatatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttctacggaaaagttagaagttttgagttttcctgtcacaaataagatttaaaatatta 215
Query: 600 ggtatctctaatgttattataaaattacatcattatataatgtatgtaatatattatata 659
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 214 ggtatctctaatgttattataacattacatcattatgtaatgtatgtaatatattatata 155
Query: 660 taataatataatatataacat 680
||| |||||||||||||||||
Sbjct: 154 taacaatataatatataacat 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space: 717570
Effective search space used: 717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
