Query= MSMg01no542_a14.b1 MSMg01no542_a14.b1 CHROMAT_FILE:
MSMg01no542_a14.b1 PHD_FILE: MSMg01no542_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:56 2005
(693 letters)
>mm_chr2_91264701_91265794
Length = 1094
Score = 1290 bits (667), Expect = 0.0
Identities = 679/683 (99%), Gaps = 1/683 (0%)
Strand = Plus / Plus
Query: 12 acagcgcacctgcacccccggaggggagagatagctgggcacctgagctgtctttttgga 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 acagcgcacctgcacccccggaggggagagatagctgggcacctgagctgtctttttgga 271
Query: 72 gaaggaa-cacatttcagactggcttttcctcttctgctttgctgtgacttccacaacat 130
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 272 gaaggaaacacatttcagactggcttttcctcttctgctttgctatgacttccacaacat 331
Query: 131 gatcaggattaagtcttccaacctgtaccaatacggctttactgtcctgaaatccccatt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gatcaggattaagtcttccaacctgtaccaatacggctttactgtcctgaaatccccatt 391
Query: 191 aacaaatgcctaactgcacatgtcatgatcaggtagcattgtctgagataggcacttaga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aacaaatgcctaactgcacatgtcatgatcaggtagcattgtctgagataggcacttaga 451
Query: 251 cctacgtcaggctaaaatgaaaacccaagtaaatcaaagtgtaagtaaacattgcctgat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cctacgtcaggctaaaatgaaaacccaagtaaatcaaagtgtaagtaaacattgcctgat 511
Query: 311 ccttacacgaaccaaaggagtaatggaaactgggccagaactgtcttgggtctgttaact 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccttacacgaaccaaaggagtaatggaaactgggccagaactgtcttgggtctgttaact 571
Query: 371 tagactacgctgattaccttccctctatgctacagtggctactgctttaaaatgattggg 430
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 572 tagactacgctgattaccttccctctatgctacagtggctactgttttaaaatgattggg 631
Query: 431 actaaaaatgtatctgataataaactactgcatcagaaaatacttggagtatgcaaaaag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 actaaaaatgtatctgataataaactactgcatcagaaaatacttggagtatgcaaaaag 691
Query: 491 taacacaccttgatgataccgttgttacaacacaatgactttacagattagagcagaata 550
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 692 taacacaccttgatgataccattgttacaacacaatgactttacagattagagcagaata 751
Query: 551 catgagtcaggccacctatatgtgcaaatgacctaacttcactgttctttctggcaaatt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 catgagtcaggccacctatatgtgcaaatgacctaacttcactgttctttctggcaaatt 811
Query: 611 aattcttcaaaaccagtacctactactgtcattacagtaaggattcaataatataataat 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aattcttcaaaaccagtacctactactgtcattacagtaaggattcaataatataataat 871
Query: 671 ctcggtatagcatctgctacata 693
|||||||||||||||||||||||
Sbjct: 872 ctcggtatagcatctgctacata 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1094
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1084
Effective search space: 740372
Effective search space used: 740372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_a14.g1 MSMg01no542_a14.g1 CHROMAT_FILE:
MSMg01no542_a14.g1 PHD_FILE: MSMg01no542_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:56 2005
(584 letters)
>mm_chr2_91433459_91434442
Length = 984
Score = 731 bits (378), Expect = 0.0
Identities = 384/386 (99%)
Strand = Plus / Minus
Query: 199 atgtagatgctaggaatccaatcctagtgctctgtatgaacaactagtgctcttaattgc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 atgtagatgctaggaatccaatcctagtgctctgtatgaacaactagtgctcttaattgc 925
Query: 259 tgagctacctttctagctccttgttgcatatactttttgagacatattgctctatagaat 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tgagctacctttctagctccttgttgcatatactttttgagacatattgctctatagaat 865
Query: 319 agggtggactcaaagttgatctcctgctagttaagtgtctcaattgctggggctataagc 378
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 agggtggactcaaagttgagctcctgctagttaagtgtctcaattgctggggctataagc 805
Query: 379 atgtagcatcctgcttggctctaagtactttttagttaaataagattcactagtaattaa 438
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 804 atgtagcatcctgcttggctctaagtactttttagtaaaataagattcactagtaattaa 745
Query: 439 ttatgaacacaaaatatagctcaaggtgttacacttctgaaatcctacaagaaaacaatt 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttatgaacacaaaatatagctcaaggtgttacacttctgaaatcctacaagaaaacaatt 685
Query: 499 ttgggcaaatattaatataaaaaaagttgatgcccattaatttattattttaatcctagc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgggcaaatattaatataaaaaaagttgatgcccattaatttattattttaatcctagc 625
Query: 559 accatggaagcagtcagggcaatata 584
||||||||||||||||||||||||||
Sbjct: 624 accatggaagcagtcagggcaatata 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
