CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGG
AATTCTTTATTCTGTTTTGTTTGTTTTGGAGACCAGATCCTGCTATGCTG
CCTAACCTTAAACTAGCAATCTTCTTGCCTTAGTTTTTAATAAGCTTATC
CTTTCAGCCACTGGCTTAGCTAGCTTGCTTCAAAGCTCTCATATTCCTGG
TTTCCCCACCCCAACTGAGTGTTTTTCCCCCACCTTTTGTATCTTCTAGG
TCATTTATCAATTTATTTAGGACTGGGCAGCCTGGGAATCACAACTAGGT
TATCCTATGTGCCTTTCCTCAGAGCAAAGTGACTCATCTCATTACCTGAA
ATCCTTGTTTCCTCTGGTATTTCCTCCTTTGCTGCATATCAGCAAAGGTA
GCTGCTCCCGTTGGGTAGGTATAGGCCATATGCGGTAGGAAGCTCATCTG
ATCCAGTCCTGGGTATGGTCGTAGCCCGGGGATGCTGGTCTGGACTGGTG
GCATGAAAGTGGCAGGGGGAAATGCGCTCTGTGGTGGAAGAGGGGTGTAT
AAAGGCTTGGCACTAAATGGGTTCATGCCGAACACAGGGTTGTTGCTTTT
ATTGTCCAGGTTATTAGAATTTGAAAACTCTTTCTTGATAAAAGTCAAAT
TCAGAGGCTCATCTGAATTCTCAGACGATGAAGAAACACTGTTGTGGTCT
AAGTTTATGCTAGTAGCTTTTGTTTTGTTCTTTGTGGCTATAATACTTTT
GGGTTCTN

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGACATGCCCTTAGTACACATCTCTA
ATCTCTAACAATGAAGGTAAGGTTACTTGTTAAGGAAGCAGTCATCTTTG
AGAGTAACTTCAAATTGAGAGGCAGACAAAAGGCATTTCAAATCATAGAA
AATTTTGACAGAATGAGTCAGAGATAGGATACACCCAACTCTCTAGAGAA
CAGCACAGAAAGGAGAGGCTACTTGAGAGCAGTGAAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGTTTTAGCAGAACAAT
TTTACAAAGACAGGTGGCAAAGAAAACAAGAGAAATATAAGTGAAGATAG
AACAAGCCCGAGAATGAGGAGCCAGAAGGTTAGAACACATTGTCAAAGTT
AGTGTGAGGCCAAGCAGAGCAATTCAGTGAGAAGCCAAGAGAAACCAGAT
TGAATCAGTCAGCTTGGAAGATTAGATTATGGAGGCTAGAAGCTTCCAGG
TTTGGGCCTAGAGATAGCTAAAACTGAGAAAGAAACACTCTGGGCTCAGC
CCAAGCTGTGTATTCACATAGCTTGGGTACAGCTCTCATCTCATTCTTCT
ATATGAAGAAATAAAAGCAAAATTTACACTGGAGGGGTCATAAAGAAAAC
AATATACATTTTTAAGTCAAGGGGAAAAAAAGAGACAATGGGTGGAAAGA
TG

Query= MSMg01no542_g08.b1 MSMg01no542_g08.b1 CHROMAT_FILE:
MSMg01no542_g08.b1 PHD_FILE: MSMg01no542_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:25 2005
         (709 letters)



>mm_chr2_44851044_44852152
          Length = 1109

 Score = 1344 bits (695), Expect = 0.0
 Identities = 701/703 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctttattctgttttgtttgttttggagaccagatcctgctatgctgcctaacctt 66
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 207 gaattctttattctgttttgtttgttttggagaccggatcctgctatgctgcctaacctt 266

                                                                       
Query: 67  aaactagcaatcttcttgccttagtttttaataagcttatcctttcagccactggcttag 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaactagcaatcttcttgccttagtttttaataagcttatcctttcagccactggcttag 326

                                                                       
Query: 127 ctagcttgcttcaaagctctcatattcctggtttccccaccccaactgagtgtttttccc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctagcttgcttcaaagctctcatattcctggtttccccaccccaactgagtgtttttccc 386

                                                                       
Query: 187 ccaccttttgtatcttctaggtcatttatcaatttatttaggactgggcagcctgggaat 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccaccttttgtatcttctaggtcatttatcaatttatttaggactgggcagcctgggaat 446

                                                                       
Query: 247 cacaactaggttatcctatgtgcctttcctcagagcaaagtgactcatctcattacctga 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cacaactaggttatcctatgtgcctttcctcagagcaaagtgactcatctcattacctga 506

                                                                       
Query: 307 aatccttgtttcctctggtatttcctcctttgctgcatatcagcaaaggtagctgctccc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aatccttgtttcctctggtatttcctcctttgctgcatatcagcaaaggtagctgctccc 566

                                                                       
Query: 367 gttgggtaggtataggccatatgcggtaggaagctcatctgatccagtcctgggtatggt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gttgggtaggtataggccatatgcggtaggaagctcatctgatccagtcctgggtatggt 626

                                                                       
Query: 427 cgtagcccggggatgctggtctggactggtggcatgaaagtggcagggggaaatgcgctc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cgtagcccggggatgctggtctggactggtggcatgaaagtggcagggggaaatgcgctc 686

                                                                       
Query: 487 tgtggtggaagaggggtgtataaaggcttggcactaaatgggttcatgccgaacacaggg 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgtggtggaagaggggtgtataaaggcttggcactaaatgggttcatgccgaacacaggg 746

                                                                       
Query: 547 ttgttgcttttattgtccaggttattagaatttgaaaactctttcttgataaaagtcaaa 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttgttgcttttattgtccaggttattagaatttgaaaactctttcttgataaaagtcaaa 806

                                                                       
Query: 607 ttcagaggctcatctgaattctcagacgatgaagaaacactgttgtggtctaagtttatg 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttcagaggctcatctgaattctcagacgatgaagaaacactgttgtggtctaagtttatg 866

                                                      
Query: 667 ctagtagcttttgttttgttctttgtggctataatacttttgg 709
           ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 867 ctagtagcttttgttttgttctttgtggctataatacctttgg 909


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space:   768201
Effective search space used:   768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)