Query= MSMg01no544_l17.b1 MSMg01no544_l17.b1 CHROMAT_FILE:
MSMg01no544_l17.b1 PHD_FILE: MSMg01no544_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:29 2005
(694 letters)
>mm_chr2_44659884_44660977
Length = 1094
Score = 1295 bits (670), Expect = 0.0
Identities = 685/690 (99%)
Strand = Plus / Minus
Query: 5 gaattcctacgtgtatcatctcaccttagtttttgttacaggaatttattttattaaccc 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 894 gaattcctacgtgtatcatctcaccttagtttttgttagaggaatttattttattaaccc 835
Query: 65 gtgatgaatatgacattctagctattatattactatagcacagcgtgagataatgtttct 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gtgatgaatatgacattttagctattatattactatagcacagcgtgagataatgtttct 775
Query: 125 ttttaaaagctgtctaaatgaagtctttccaataattgttaacaatcttatgaaattctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttttaaaagctgtctaaatgaagtctttccaataattgttaacaatcttatgaaattctg 715
Query: 185 ttagaaatacatggaaagtgttgcactttgatgccatacctggatgtgaggagaaaaatg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 714 ttagaaatacatggaaagtgttgcactttgatgccatacctggatgtgaggagagaaatg 655
Query: 245 ttggctcatgtaagaattctgtataatgtatgttcggcttaatccacctccttcacatcc 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 654 ttggctcatgtaagaattctgtataatgtatgttcagcttaatccacctccttcacatcc 595
Query: 305 tccaatgtaaagtacttgcacaggtgttattaataaaaagtaataataaaaactcttcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tccaatgtaaagtacttgcacaggtgttattaataaaaagtaataataaaaactcttcta 535
Query: 365 ttttaaataaggatgctattctcccagctttgaagcttgcacatactctctaacttatcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttttaaataaggatgctattctcccagctttgaagcttgcacatactctctaacttatcc 475
Query: 425 cagcttttgctcatctggtctttaaatggctcctttcatgtggttggcccacgagccgtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cagcttttgctcatctggtctttaaatggctcctttcatgtggttggcccacgagccgtg 415
Query: 485 cgtactgccgttcaatcacgccactgtacattgccatcatgagggtggtttgcatgattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cgtactgccgttcaatcacgccactgtacattgccatcatgagggtggtttgcatgattt 355
Query: 545 gcatttcctgtgctgtttgagcttcaatgagctccaagcaccacgtagaagaaaccactg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcatttcctgtgctgtttgagcttcaatgagctccaagcaccacgtagaagaaaccactg 295
Query: 605 ccaaataatgcaatgattttagtcaaaccagatgagcttgtactgaagtcaggctaccaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ccaaataatgcaatgattttagtcaaaccagatgagcttgtactgaagtcaggctaccaa 235
Query: 665 gtcgattgggggttgggaggtgttgtcagg 694
||| ||||||||||||||||||||||||||
Sbjct: 234 gtcaattgggggttgggaggtgttgtcagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_l17.g1 MSMg01no544_l17.g1 CHROMAT_FILE:
MSMg01no544_l17.g1 PHD_FILE: MSMg01no544_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:29 2005
(619 letters)
>mm_chr2_44578569_44579587
Length = 1019
Score = 1151 bits (595), Expect = 0.0
Identities = 615/623 (98%), Gaps = 4/623 (0%)
Strand = Plus / Plus
Query: 1 aagactatttttcaaggtttgaaaaagaagttgtcgatgaatatgaaactctattcctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aagactatttttcaaggtttgaaaaagaagttgtcgatgaatatgaaactctattcctaa 256
Query: 61 actccttcaatgctcgagcacttcagccacctcacaagaatgggcatcagttatcagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 actccttcaatgctcgagcacttcagccacctcacaagaatgggcatcagttatcagtaa 316
Query: 121 gagttgttcaaaacaaagtacacacactctcctctctctgtctctc--tctctctt--tc 176
||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct: 317 gagttgttcaaaacaaagtacacacactctcctctctctctctctctttctctctttctc 376
Query: 177 tctttctctctctctctctctctctctctctctctctctctctctctctctctctccccc 236
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tctttctctctttctctctctctctctctctctctctctctctctctctctctctccccc 436
Query: 237 caccccatctgtctgtctgtctctctctcactggtacacatatattcacctcattggaga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caccccatctgtctgtctgtctctctctcactggtacacatatattcacctcattggaga 496
Query: 297 atgaatttattattagaaaggtaatttctcatgtactgatatctttagacattatctgct 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atgaatttattattagaaaggtaatttctcatgtactgatatctttagacattatctgct 556
Query: 357 taatataacaagcaattattcaatagctacaaataacactttttaactctaatgattttt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 taatataacaagcaattattcaatagctacaaataacactttttaactctaatgattttt 616
Query: 417 ataacctaagcaaagctatttttgcctggccaaaaaattctctttctctagattaattta 476
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 617 ataacctaagcaaagctatttttgcctggccaaaaaattccctttttctagattaattta 676
Query: 477 acacttgactcttaacttctttagttttataaagaagtgttcttctttttgtacaagaat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acacttgactcttaacttctttagttttataaagaagtgttcttctttttgtacaagaat 736
Query: 537 taacatttattctctaaaacatatattatgtattttagctactgtccaaaaaaattctgt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taacatttattctctaaaacatatattatgtattttagctactgtccaaaaaaattctgt 796
Query: 597 caatgctcatttaagtctaatta 619
|||||||||||||||||||||||
Sbjct: 797 caatgctcatttaagtctaatta 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
