Query= MSMg01no545_l21.b1 MSMg01no545_l21.b1 CHROMAT_FILE:
MSMg01no545_l21.b1 PHD_FILE: MSMg01no545_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:48 2005
(630 letters)
>mm_chr2_10351976_10353005
Length = 1030
Score = 1168 bits (604), Expect = 0.0
Identities = 622/628 (99%)
Strand = Plus / Plus
Query: 3 cggaattcagcgtatcgtatagtttctgtcctcagaggaaggcgggaggcttcatgctca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattcagcgtatcgtatagtttctgtcctcagaggaaggcgggaggcttcatgctca 262
Query: 63 cgtgcttccaccattcgacgtagctgaatatgggagcatcatcaactctctggcgaggtt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 263 cgtgcttccaccattcgacgtagctgaatatgggagcatcatcaactctctggcaaggtt 322
Query: 123 tttcctttctgtctcatgaaattcaggtatagagtagcgccacctggtcagcagttaaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttcctttctgtctcatgaaattcaggtatagagtagcgccacctggtcagcagttaaca 382
Query: 183 tctcagttgtagggttttatgattaactctatcttcaggttttatagcttcctatctggg 242
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 tctcagttgtagggttttatgattaactctatcttcaggttttataacttcctatctggg 442
Query: 243 aagaatctgtagtaccattctaatatgcagacagcttttctgaaggctgccacagctgcc 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagaatcagtagtaccattctaatatgcagacagcttttctgaaggctgccacagctgcc 502
Query: 303 aaagaaacaatcactaaggggaggctgggtggcccagagcagttccccttggctaatctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaagaaacaatcactaaggggaggctgggtggcccagagcagttccccttggctaatctg 562
Query: 363 agagttcttggtgagtatttatagacggatgtatacctgaagccccagagatggctggac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agagttcttggtgagtatttatagacggatgtatacctgaagccccagagatggctggac 622
Query: 423 agcaggtttttttctggcgcgttgcctagactgcgggatcttaggcaacacttttagatg 482
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 623 agcaggtttttttctggcgcgttgcctagactgcgggattttaggcaacacttttagatg 682
Query: 483 ctccccattcagcgtttctttactaacctttcacaccgggctcaagcatctctgtgcgac 542
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctccccattcagtgtttctttactaacctttcacaccgggctcaagcatctctgtgcgac 742
Query: 543 tctgccgtcctgatttgtatctggtaaagaggtagaagatgctctctcaggctccccagg 602
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 743 tctgccgtcctgatttgtatctggtaaagaggtagaagatgccctctcaggctccccagg 802
Query: 603 tcagcagtcagttgccctggtgggggtg 630
||||||||||||||||||||||||||||
Sbjct: 803 tcagcagtcagttgccctggtgggggtg 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_l21.g1 MSMg01no545_l21.g1 CHROMAT_FILE:
MSMg01no545_l21.g1 PHD_FILE: MSMg01no545_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:48 2005
(402 letters)
>mm_chr2_10434195_10434996
Length = 802
Score = 669 bits (346), Expect = 0.0
Identities = 400/448 (89%), Gaps = 46/448 (10%)
Strand = Plus / Minus
Query: 1 cattccttgtgtgtatgtgtgcatacgtgtgtccatatacatgtatgtttatgt------ 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cattccttgtgtgtatgtgtgcatacgtgtgtccatatacatgtatgtttatgttatata 623
Query: 55 ----------------------------------------tatatatatatatatatata 74
||||||||||||||||||||
Sbjct: 622 tatatatatatatatatatatatatatatatatatgtatatatatatatatatatatata 563
Query: 75 ttcatttacacagatgtacacgcacacacatgtaaacacacatgcacatacatgggtgac 134
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 562 ttcatttacacagatgtacacgcacacacatgtaaacacacatgcacatacatgggtggc 503
Query: 135 atcacaggaataccaggataatctctaactgaagttaatcatgaatttgaaatcctgatt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atcacaggaataccaggataatctctaactgaagttaatcatgaatttgaaatcctgatt 443
Query: 195 ctcctgactttgtcaatcatttacagctggtgactgagaccattcactgtcccactactg 254
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctccagactttgtcaatcatttacagctggtgactgagaccattcactgtcccactactg 383
Query: 255 cagtctctaaaactctaagtcacctatcattcaaatggatcgatgagtgccattcctgtg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cagtctctaaaactctaagtcacctatcattcaaatggatcgatgagtgccattcctgtg 323
Query: 315 tgtgtatctgtgcttgcttgtatatgtttgtgtggatgtatatgtctattcatatacaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgtgtatctgtgcttgcttgtatatgtttgtgtggatgtatatgtctattcatatacaca 263
Query: 375 catgcacatgcacacaaaactatacaca 402
||||||||||||||||||||||||||||
Sbjct: 262 catgcacatgcacacaaaactatacaca 235
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
