Query= MSMg01no546_b11.b1 MSMg01no546_b11.b1 CHROMAT_FILE:
MSMg01no546_b11.b1 PHD_FILE: MSMg01no546_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:16 2005
(390 letters)
>mm_chr2_93893586_93894375
Length = 790
Score = 731 bits (378), Expect = 0.0
Identities = 387/390 (99%)
Strand = Plus / Minus
Query: 1 attctctttttggggagaagagtgaacatgggtcagtctttatcagcataaatggttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 attctctttttggggagaagagtgaacatgggtcagtctttatcagcataaatggttaat 531
Query: 61 cttactagttagaatttttggttaaaaggttgggcagtggcctatacctgcttaatatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cttactagttagaatttttggttaaaaggttgggcagtggcctatacctgcttaatatgg 471
Query: 121 gcaaaaaccctcaaggttcatgcccaacactgcaagacaaacaaaaagaatattgattat 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 gcaaaaaccctcaaggttcatgcccaacactgcaaaacaaacaaaaagaatattgattat 411
Query: 181 atcctataacagagatacaatcacaagttaaagtcaaaatgggtcagttagtcagggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atcctataacagagatacaatcacaagttaaagtcaaaatgggtcagttagtcagggtgc 351
Query: 241 tgaggggagcagggctgagggtactacacagtgactcctttatcagtaagtatcctcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgaggggagcagggctgagggtactacacagtgactcctttatcagtaagtatcctcccc 291
Query: 301 ttatccctcctgtcaccctacagtgtatcacgttccccttggggtcaaacaaaggctcct 360
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 290 ttatccctcctgccaccctacagtatatcacgttccccttggggtcaaacaaaggctcct 231
Query: 361 tctctctactacattctgcctacaaagaag 390
||||||||||||||||||||||||||||||
Sbjct: 230 tctctctactacattctgcctacaaagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_b11.g1 MSMg01no546_b11.g1 CHROMAT_FILE:
MSMg01no546_b11.g1 PHD_FILE: MSMg01no546_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:16 2005
(651 letters)
>mm_chr2_93836316_93837366
Length = 1051
Score = 1174 bits (607), Expect = 0.0
Identities = 640/651 (98%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 1 gcggctcttcagagtccacagcacaggaagccactgacagcaagcacagggacaggcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gcggctcttcagagtccacagcacaggaagccactgacagcaagcacagggacaggcata 261
Query: 61 caagacacaatgggcagccattaaaaaaacaaaacaaacaaacaaaaaaaaaatagaaag 120
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 262 caagacacaatgggcagccattaaaaaaacaaaacaaacaaac-aaaaaaaaccagaaag 320
Query: 121 aaatatgaagtcagcgggtttctgagagggcaatgcaataaacagaaggcagaagagtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatatgaagtcagcgggtttctgagagggcaatgcaataaacagaaggcagaagagtag 380
Query: 181 cttcgtcttctccctctatctctatgctgaagcaagtctgaaggctggagctgtctacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcgtcttctccctctatctctatgctgaagcaagtctgaaggctggagctgtctacca 440
Query: 241 gctcctgtttctcttgcagtgcatgtcctcacaaagaagccaatgccgggatgttcaggg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 441 gctcctgtttctcttgcagtgcatgtcctcacaaagaagccaatgccaggatgttcacgg 500
Query: 301 tggttctggaacattagtgctgcactaagaggggcagtggggctgccggagctcacggat 360
||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||
Sbjct: 501 tggttctggaacattagtgctgccctaaaaggggcagtggggctgccggagctcatggat 560
Query: 361 ccacacacccaggctcaagtaaagaacaagagaactctcaactgggtgcctcctattctg 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 ccacacacccaggctcaagtaaagaacaaaagaactctcaactgggtgcctcctattctg 620
Query: 421 ttcatattttattctaaacaacaaaattgatttcttgagaaatatttaatatttagaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcatattttattctaaacaacaaaattgatttcttgagaaatatttaatatttagaggc 680
Query: 481 taacttcataaaaatagaactcaaagcctgacttagtagtgtgtgccagaaatcctagca 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 taacttcataaaaatagaactcaaagcctgacttagtggtgtgtgccagaaatcctagca 740
Query: 541 cttgggaggccgaagcaagtttgtggctctcctggtctatggtatgtcaatgaacaagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgggaggccgaagcaagtttgtggctctcctggtctatggtatgtcaatgaacaagtg 800
Query: 601 ttcttttcttttctgtagaacaggaccactcttagggctaaaaaactatga 651
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 801 ttcttttcttttctgtagaacaggaccactcttagagctaaaaaactatga 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
