Query= MSMg01no546_o01.b1 MSMg01no546_o01.b1 CHROMAT_FILE:
MSMg01no546_o01.b1 PHD_FILE: MSMg01no546_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:19 2005
(419 letters)
>mm_chr2_31017959_31018775
Length = 817
Score = 632 bits (327), Expect = 0.0
Identities = 353/365 (96%), Gaps = 9/365 (2%)
Strand = Plus / Minus
Query: 5 gaattctaagtta--tttcagagctataaagtaagatcttgtcatcccctcaaatttttt 62
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 362 gaattctaagttaac---cagagctatcaagtaagatcttgtcatcccctcaaatttttt 306
Query: 63 aatgtattttatgtagatagagagacacacaaaagtgaattcttactaaagtaagtttca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatgtattttatgtagatagagagacacacaaaagtgaattcttactaaagtaagtttca 246
Query: 123 ggtttaccgaaataaaataagttgg--ttttgttgttgttg--ttgttttgttttgtttg 178
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 245 ggtttaccgaaataaaataagttggttttttgttgttgttgttttgttttgttttgtttg 186
Query: 179 agacagggtttctctgtgtagtcctggctgacctggaactcactttgtagaccatgctgg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 agacagggtttctctgtgtagtcctggctgacctggaactcactttgtagaccatgctgg 126
Query: 239 cctctaactcataaattcgcctgcctctgcctcccaagtgctgggattaaaggcgtgctg 298
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cctcgaactcagaaattcgcctgcctctgcctcccaagtgctgggattaaaggcgtgctg 66
Query: 299 tgccaccacgcccggcataaagtaagtttttaaaaagacaacagcaagctaataaacatg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgccaccacgcccggcataaagtaagtttttaaaaagacaacagcaagctaataaacatg 6
Query: 359 ctgcc 363
|||||
Sbjct: 5 ctgcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 817
Length adjustment: 9
Effective length of query: 410
Effective length of database: 808
Effective search space: 331280
Effective search space used: 331280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_o01.g1 MSMg01no546_o01.g1 CHROMAT_FILE:
MSMg01no546_o01.g1 PHD_FILE: MSMg01no546_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:19 2005
(361 letters)
>mm_chr2_30860142_30860901
Length = 760
Score = 683 bits (353), Expect = 0.0
Identities = 359/361 (99%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 1 tcccgttgtgaactagtaggactggggtgtagagagctcagtgggggagacttgtgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccgttgtgaactagtaggactggggtgtagagagctcagtgggggagacttgtgaggg 260
Query: 61 cccctctcctggacaggcttctcagcccttctcctccgtgttgtttgtaggcctcacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccctctcctggacaggcttctcagcccttctcctccgtgttgtttgtaggcctcacagg 320
Query: 121 catgaagaacctgggaaactcctgttacatgaatgctgccctgcaggccttgtccaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgaagaacctgggaaactcctgttacatgaatgctgccctgcaggccttgtccaattg 380
Query: 181 gtaggttgtcatctgagggaagggcaggaactgtccctggcaaaacctagaaagagcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggttgtcatctgagggaagggcaggaactgtccctggcaaaacctagaaagagcagc 440
Query: 241 agcctccaaccagtgccgtgtacattggtcatagacattccataagatacactctcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 441 agcctccaaccagtgccgtgtacattggtcatagacattccataagatatac-ctcaaag 499
Query: 301 cccctaaaacaaggcatgcctggtgactgccgtccctttgagtttcatgtgagtcctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cccctaaaacaaggcatgcctggtgactgccgtccctttgagtttcatgtgagtcctcag 559
Query: 361 a 361
|
Sbjct: 560 a 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 760
Length adjustment: 9
Effective length of query: 352
Effective length of database: 751
Effective search space: 264352
Effective search space used: 264352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
