Query= MSMg01no547_d07.b1 MSMg01no547_d07.b1 CHROMAT_FILE:
MSMg01no547_d07.b1 PHD_FILE: MSMg01no547_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:46 2005
(685 letters)
>mm_chr2_60774839_60775923
Length = 1085
Score = 1290 bits (667), Expect = 0.0
Identities = 676/679 (99%)
Strand = Plus / Minus
Query: 7 gaattccactttgtattactgaacactagaaataaatcctacacagctgagggaacttcc 66
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattccactttgtaagactgaacactagaaataaatcctacacagctgagggaacttcc 826
Query: 67 cagcaggtatagatcatggtacaattagaatttattaacggaaggacattgttactaata 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cagcaggtatagatcatggtacaattagaatttattaacggaaggacattgttactaata 766
Query: 127 acaacaacaatgacagtcacgatgatggctatcattaccccttattaaatatttacgcaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 acaacaacaatgacagtcacgatgatggctatcattaccccttattaaatatttacgcaa 706
Query: 187 ggcaggctccgatccaggaattcatatgtatgcaaatctgttaaaatatatagctaggca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ggcaggctccgatccaggaattcatatgtatgcaaatctgttaaaatatatagctaggca 646
Query: 247 tgagtatatttcctggtagaataaacaataagaataaaaggacagtgataagttaatgta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgagtatatttcctggtagaataaacaataagaataaaaggacagtgataagttaatgta 586
Query: 307 gttgctaaacagaataaattccatctacaaatatccatttcatgtaatcaggaaaataat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gttgctaaacagaataaattccatctacaaatatccatttcatgtaatcaggaaaataat 526
Query: 367 atgcactctgccgtgtggggagtgatgttgctgttttatactgacaatttgaaattgttg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atgcactctgccgtgtggggagtgatgttgctgttttatactgacaatttgaaattgttg 466
Query: 427 attaacatatgctagaaagtaaaaataaattcggttgagagaataatatttggggagtgt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 attaacatatgctagaaagtaaaaataaattcggttgagagaataatatttggggagtgt 406
Query: 487 gatgtgtagctattccaagcagaacaccagcttgagtcttcgtcgacacccgcacaacag 546
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gatgtgcagctattccaagcagaacaccagcttgagtcttcgtcgacacccgcacaacag 346
Query: 547 tcgtgtctgtacgggtttcccatcttggctctggagtgagtgtcatactccaatgaaacc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tcgtgtctgtacgggtttcccatcttggctctggagtgagtgtcatactccaatgaaacc 286
Query: 607 atacttaacatcatttcatcactgagcttcaggtgcagctggtgctggccaagagtcttt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atacttaacatcatttcatcactgagcttcaggtgcagctggtgctggccaagagtcttt 226
Query: 667 tgttccgagtctccattgt 685
|||||||||||||||||||
Sbjct: 225 tgttccgagtctccattgt 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_d07.g1 MSMg01no547_d07.g1 CHROMAT_FILE:
MSMg01no547_d07.g1 PHD_FILE: MSMg01no547_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:46 2005
(659 letters)
>mm_chr2_60591792_60592850
Length = 1059
Score = 1176 bits (608), Expect = 0.0
Identities = 642/666 (96%), Gaps = 22/666 (3%)
Strand = Plus / Plus
Query: 1 cttcaaagtcaaatagagcttttaaaggctaatcattgccttaatgcagatgaaatatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttcaaagtcaaatagagcttttaaaggctaatcattgccttaatgcagatgaaatatga 253
Query: 61 cagaccccaagaacctcccgtccaaatgtttaacttaaatattgatcaaagaaatctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagaccccaagaacctcccgtccaaatgtttaacttaaatattgatcaaagaaatctctt 313
Query: 121 ggcttcgtctccttggagccacataaagtttaaaattcagttattttcagattttagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggcttcgtctccttggagccacataaagtttaaaattcagttattttcagattttagagt 373
Query: 181 ccaagacacagggtgcatatgttgtgtgtcgtaggcccaccccccc-------ggaaggc 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 374 ccaagacacagggtgcatatgttgtgtgtcgtaggcccaccccccccccccccggaaggc 433
Query: 234 atcagctatacctcacaatctcaatacttatatgcagaaaaatgtcaatcaactcagcaa 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atcagctatacctcacaatctcaatacttatatgcagaaaaatgtcaatcaactcagcaa 493
Query: 294 atggaattggggcctgcagtgcagggtatgtaacctcagtgacttgaaacggaaggcaga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atggaattggggcctgcagtgcagggtatgtaacctcagtgacttgaaacggaaggcaga 553
Query: 354 agggttacaagttcacagcctgcctggcttgcagagtgaggtcatgactttaaaagggtc 413
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agggtt-------cacagcctgcctggcttgcagagtgaggtcatgactttaaaagggtc 606
Query: 414 atggacatagctcagtagcataacaatttgcctggcatgtaagaggccatgactggacct 473
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atggacatagctcagtggcataacaatttgcctggcatgtaagaggccatgactggacct 666
Query: 474 ttactaaaataagagtccaccagtaataaaaccaagaaacaaagccctttggatattttg 533
|||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 667 ttactaaaataagagt--------aataaaaccaagaaacaaagacctttggatattttg 718
Query: 534 ccttgtctcagttcaagttgcatttgaaaagccgtaagtcaggctttgctgaagcagtta 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ccttgtctcagttcaagttgcatttgaaaagccgtaagtcaggctttgctgaagcagtta 778
Query: 594 caaagaaaattattgttttcccctgttatggaggcttcatatatcaaaagctgtgagttc 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 caaagaaaattattgttttcccctgttatggaggcttcatatatcaaaagctgtgagttc 838
Query: 654 aggcag 659
||||||
Sbjct: 839 aggcag 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
