Query= MSMg01no548_p16.b1 MSMg01no548_p16.b1 CHROMAT_FILE:
MSMg01no548_p16.b1 PHD_FILE: MSMg01no548_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:31:03 2005
(254 letters)
>mm_chr2_102897772_102898425
Length = 654
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 5 gaattcattacactgtcagctatataagaatctatcaagctttttcctagtacttgtgac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattacactgtcagctatataagaatctatcaagctttttcctagtacttgtgac 264
Query: 65 aaatgtttttatttttatacagtatctgacttattgataatttagtcttggcacaacaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatgtttttatttttatacagtatctgacttattgataatttagtcttggcacaacaca 324
Query: 125 aacaatgaatataatactgtgtgttttcacacttaaaacatccatgagtatttactgctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaatgaatataatactgtgtgttttcacacttaaaacatccatgagtatttactgctc 384
Query: 185 cattttctattcagttccaccagtctgtgttttgaagcacctaccgcagatttaactgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattttctattcagttccaccagtctgtgttttgaagcacctaccgcagatttaactgta 444
Query: 245 gaggctta 252
||||||||
Sbjct: 445 gaggctta 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no548_p16.g1 MSMg01no548_p16.g1 CHROMAT_FILE:
MSMg01no548_p16.g1 PHD_FILE: MSMg01no548_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:31:03 2005
(447 letters)
>mm_chr2_103065192_103066042
Length = 851
Score = 400 bits (207), Expect = e-116
Identities = 310/398 (77%), Gaps = 84/398 (21%)
Strand = Plus / Minus
Query: 1 atgagtactggaattcagatgtgt----cctatggtatcagaagtaattcctaagttagt 56
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 atgagtactggaattcagatgtgtcctacctatggtatcagaagtaattcctaagttagt 259
Query: 57 cctcattagtacttggcagaacaatattctgatcttccacaagtaatatattcttctaat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cctcattagtacttggcagaacaatattctgatcttccacaagtaatatattcttctaat 199
Query: 117 ctatctatctatctatctatctatctatctatctatctatctatctatctatctatctat 176
||||
Sbjct: 198 ctat-------------------------------------------------------- 195
Query: 177 ctatctatctatctatctatcatctatctatctatctatctatctatctatctatctatc 236
| |||| |||||||||||||||||||||||||||||||
Sbjct: 194 -------------------t--tcta---atctatctatctatctatctatctatctatc 159
Query: 237 tatctatctatctatcataggaggggaaaggaaatggggaggggtacgacacatgccatg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tatctatctatctatcataggaggggaaaggaaatggggaggggtacgacacatgccatg 99
Query: 297 gtttgtgtgtagtagtcagaagacaaccagcaggcctcagttctctctgttcaccatgta 356
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 98 gtttgtgtgtagtagtcagaagacaaccggcaggcctcagttctctctgttcaccatgta 39
Query: 357 ngtctggttactggaccaagtaagtaattaggctttgt 394
|||||||||| |||||||||||||||| |||||||||
Sbjct: 38 ggtctggttaccggaccaagtaagtaatcaggctttgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 851
Length adjustment: 10
Effective length of query: 437
Effective length of database: 841
Effective search space: 367517
Effective search space used: 367517
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
