BAC Information

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BAC

Clone NameB6Ng01-003D17
ChromosomeX (Build37)
Map Location 119,093,101 - 119,094,179
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385419, EG434907, EG245575
Downstream geneLOC100039544, Nap1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003D17.bB6Ng01-003D17.g
ACCDH841008DH841009
length1,0711,211
definitionDH841008|Mus musculus domesticus DNA, BAC clone: B6Ng01-003D17, 5' end.DH841009|Mus musculus domesticus DNA, BAC clone: B6Ng01-003D17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctctttttgagggttttcagtccttttctacctggtatcaa
atgtactcaatggttcatagtttatgaattatgtacctacctcatagttt
ccagaagagaaattcattcttttagcctaagcccttactactctgcatat
taaaagaaattatgattcgtatgaaattaagaaataaatatatgtacaac
ctatatggctcagaagctaaaggcacttgttgcccagcctgatgctgtga
ttctttcccagaactgacatgctggaatgagaaagctgcttcctaaaagt
tatgctctgacgatcacaatcatgcaatggcacaagcatgtatatacaga
caaacacacacacagacacacacacactggcacacacaatataacaatgt
attataacacaaaaatataaaaagacagcaattattagtaacctatttaa
ctcaattttatagacagcagcctaccctacacatttaaggtgtttcagta
gcatctctatacttcttacttgcaacaaaatcttaaatacaacttttcaa
cttcctcacagacaatagcattttttttaatagccttagataaacattgc
tcaattaggtaagtttttgtctgccttataggttaagaaagtattgtctt
tgactgttgattatctgagattttctgtaacatagtcattgtgtactcac
ttcccatagtaaaaatgatttctatattaataacatgattgttattgatt
ataccacatccattattatatgtgtgttttggttagagagattttgacaa
acatgagtccatctagactacaaaagacatttgacaaaactatgaagaaa
attttaaagatgaaatactaggggaagctacagaaattagtattaaacta
tatgagcaccagcttttgaaaataaacatttcattctattttatacaaaa
aataactatgagactattgaagacattatatcagagcttcagtaatttca
tctttgttttctgcataatagagaagaatatattgaccacagatgtgggt
gcacgcaatcatctactgagg
gaattcacaacagaggattcttgatgactaagaagcacttaaagaaatat
tcaacatgcttagccttcaagagatgcaaacaaaaatgaccctgaaattc
tagagtacaccaatcagaatggctaaaaaactcaggtggcagcacatgtt
ggcaagggagtggagaaagaggaacactcctccatttctggtgggattgc
aaattggtacaaccactcaggaaaccaatattgtgtttcctcagaaaatt
gaaaacagttctacctgaagacccagcaatatcactcttgggcatatacc
taaaatatgccccaccataccacaagggtatgtgctccaactccacaatg
ttcatagcagttttattggtgatagccagaagctggaaacaacccagatg
ttctgcaatggaataatggatacaaaatatgtagttcatttacacaattg
agtattatcggaatattgagaaagaggacatcatgaattttgcctgcaaa
tggatggaactagaaaatatcatcctgagtgaggtaactcagaacccaaa
gaactctcatggtgtgtacttacgaataagtagatatcagccaaaaatgt
acagaatacctacctatgatacaattcatagaattcataaagttaacaag
ctgaataactcaagtgaacatgcttcaatccctcttgggagggagaagaa
aggaataaggcaggcagagggaggaagagaccttggtgggataggggagc
agaaaaggaaaatatggtcaggtattgggagtctcaggagaaaagtcctg
agaaccagtagaatgagtgtatatatatacaatctctgagggttgggtgt
ggacgaaccctctaaaaagtaccagagacctgggaagagagacactctca
ggagtcaaggtagatgccttagaagaaatacccaacagtgggagaagact
tataagactagagtagaaatcagaaatcaggggtgatggggttgccatcc
acatctaaactcactagaattgtcctgtcttaagactgcagacaaaattg
aaagagacagagatagaggtcatgacagtccaattgaatcagcttaggaa
acttcagctccactgtatcgatcaggatctggaccgagcccatgcattcc
tggtctaagagttactagacagtgcgaaacttatctcatcagtaggtact
gataagactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_119093101_119094179
seq2: B6Ng01-003D17.b_44_1114

seq1  GAATTCCTTCTCTTTTTGAGGGTTTTCAGTCCTTTTCTACCTGGTATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTCTTTTTGAGGGTTTTCAGTCCTTTTCTACCTGGTATCAA  50

seq1  ATGTACTCAATGGTTCATAGTTTATGAATTATGTACCTACCTCATAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTCAATGGTTCATAGTTTATGAATTATGTACCTACCTCATAGTTT  100

seq1  CCAGAAGAGAAATTCATTCTTTTAGCCTAAGCCCTTACTACTCTGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAGAAATTCATTCTTTTAGCCTAAGCCCTTACTACTCTGCATAT  150

seq1  TAAAAGAAATTATGATTCGTATGAAATTAAGAAATAAATATATGTACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAATTATGATTCGTATGAAATTAAGAAATAAATATATGTACAAC  200

seq1  CTATATGGCTCAGAAGCTAAAGGCACTTGTTGCCCAGCCTGATGCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGCTCAGAAGCTAAAGGCACTTGTTGCCCAGCCTGATGCTGTGA  250

seq1  TTCTTTCCCAGAACTGACATGCTGGAATGAGAAAGCTGCTTCCTAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCAGAACTGACATGCTGGAATGAGAAAGCTGCTTCCTAAAAGT  300

seq1  TATGCTCTGACGATCACAATCATGCAATGGCACAAGCATGTATATACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCTGACGATCACAATCATGCAATGGCACAAGCATGTATATACAGA  350

seq1  CAAACACACACACAGACACACACACACTGGCACACACAATATAACAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACACACAGACACACACACACTGGCACACACAATATAACAATGT  400

seq1  ATTATAACACAAAAATATAAAAAGACAGCAATTATTAGTAACCTATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAACACAAAAATATAAAAAGACAGCAATTATTAGTAACCTATTTAA  450

seq1  CTCAATTTTATAGACAGCAGCCTACCCTACACATTTAAGGTGTTTCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTTTATAGACAGCAGCCTACCCTACACATTTAAGGTGTTTCAGTA  500

seq1  GCATCTCTATACTTCTTACTTGCAACAAAATCTTAAATACAACTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTATACTTCTTACTTGCAACAAAATCTTAAATACAACTTTTCAA  550

seq1  CTTCCTCACAGACAATAGCATTTTTTTTAATAGCCTTAGATAAACATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCACAGACAATAGCATTTTTTTTAATAGCCTTAGATAAACATTGC  600

seq1  TCAATTAGGTAAGTTTTTGTCTGCCTTATAGGTTAAGAAAGTATTGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAGGTAAGTTTTTGTCTGCCTTATAGGTTAAGAAAGTATTGTCTT  650

seq1  TGACTGTTGATTATCTGAGATTTTCTGTAACATAGTCATTGTGTACTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTGATTATCTGAGATTTTCTGTAACATAGTCATTGTGTACTCAC  700

seq1  TTCCCATAGTAAAAATGATTTCTATATTAATAACATGATTGTTATTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATAGTAAAAATGATTTCTATATTAATAACATGATTGTTATTGATT  750

seq1  ATACCACATCCATTATTATATGTGTGTTTTGGTTAGAGAGATTTTGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACATCCATTATTATATGTGTGTTTTGGTTAGAGAGATTTTGACAA  800

seq1  ACATGAGTCCATCTAGACTACAAAAGACATTTGACAAAACTATGAAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTCCATCTAGACTACAAAAGACATTTGACAAAACTATGAAGAAA  850

seq1  ATTTTAAAGATGAAATACTAGGGGAAGCTACAGAAATTAGTATTAAACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGATGAAATACTAGGGGAAGCTACAGAAATTAGTATTAAACTA  900

seq1  TATGAGCACCAGCTTTTGAAAATAAACATTTCATTCTATTTTATAACAAA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATGAGCACCAGCTTTTGAAAATAAACATTTCATTCTATTTTAT-ACAAA  949

seq1  AAATAACTATGAGACTATTGAAGACATTATATCAAGAGCTCCAAGTAATT  1000
      ||||||||||||||||||||||||||||||||| |||||| | |||||||
seq2  AAATAACTATGAGACTATTGAAGACATTATATC-AGAGCTTC-AGTAATT  997

seq1  TCATCTTTGTTTTTCTGCATAATAGAGAAGAAATATTATTGAACCACAGA  1050
      ||||||||| |||||||||||||||||||| |||| ||||| ||||||||
seq2  TCATCTTTG-TTTTCTGCATAATAGAGAAG-AATA-TATTG-ACCACAGA  1043

seq1  TGTGGGTGCACGCAAACATCTAACTGAGG  1079
      ||||||||||||||| ||||| |||||||
seq2  TGTGGGTGCACGCAATCATCT-ACTGAGG  1071