MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-004G03
Chromosome	X (Build37)
Map Location	14,847,473 - 14,848,459
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668991, 4930403L05Rik
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	4930403L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67395 MGI:1914645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930403L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383460 GeneID:67395 MGI:1914645
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930403L05 gene transcript_id : NM_026128.2

name	4930403L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385638 CCDS:CCDS30031.1 GeneID:67395 MGI:1914645
definition	GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : novel gene similar to protein phosphatase 1 regulatory subunit 2 Ppp1r2 product : type 1 protein phosphatase inhibitor protein_id : NP_080404.1

name	LOC668991 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270997 GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to ribosomal protein L6 pseudo : _no_value transcript_id : XR_033255.1

clone name	MSMg01-459E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167O06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D21
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-206G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-004G03.b	B6Ng01-004G03.g
ACC	DH841808	DH841809
length	1,244	1,030
definition	DH841808\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G03, 5' end.	DH841809\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatatctaaaataaaaaaaaaaaccaatatatagcaag caagtagcaagcatcagactaaatggagagaaacttgaagcaatcccact aaaataagggactagacaaggctgcccactctctccctacatattcaaca tagtacttgaagtcctagccagaggaattagacaacagaaggagatcaaa gtaattcacattggaaaggaagaagtcaaaatatcagtatttgcagatga tatgatactatgtataagtgacaccaaaaattccaccagagaactcctaa acctgataaaaagcttcagtgaagtacctagatttaaaagtaactcaaac aaatcattggcatttctctacacaaaggataaacaggctgagaaagaaat tagtgaaacaaaacccttcaaaatagtcacaaataacattaaatactttg gtgtgactctacctaaggtagtgaaagatttgtagtataagaacttcaag agtctgaagaaagaagttgaagaacatctcagaagttggaaacatctccc atggtcatggattggcaggattaatatagtaaaaatggctatcttaccaa aagcaatctacagattcaatgcaattctcatcaaaattccaactcaattc ttcaaagagttagaaagggcaatttgcaagtccttctgtaataacaaaaa acctaggatagcaaaaactattctcaacaataaaagaacctctggtggaa tcaccatcccccagtttaagctgtgctaaagagcaatcgtgataaaaaaa aaaaacaaaaaaacaaaaaaacaaaacaaaaaacaaaaaactgcatggtc ctggtacaggaacagacaagtaaatcagtggaatttaattcaagatgcag aaatgaacccacacacctatggtcacttaatctttgacaagtgctaaaac catcactggaaagaagacagcattttcaacaaatgatgttggctaaactg atggttaacatacagaagatctagatgatccgtataatctcttgtacaaa gcctcagtctagtagatcagaactctcaaaaaaacagaaaaactgaaact tataagataagtaggaatagctgagaagactgggtccatgcaaaacttct aacgaacgcatgtgtgtcgtagatccggaaatgtaacgccttgaactgat atcttcgcattcaatgaatgaatcccttaggcagtaagtatctc	gaattctcactgagtgcttttacaaaacaccttataaagatgcttgggaa aatcatccatttgcaaaccaagaagaatgacttcactacaaaaccaaatc tggtactagatatctgccctctgaactatgaaaaaatgaaccatttttct gttgtgtttttgagacacaggctaagcaagaaattataaatctgcctcca tttactaggtgttggatttttatgtgtgtgccactatagatgacagaaaa taaatgatttttttaaatttggtctatggtattttgatatggcattaacc agagttattagggacagacaggctatagcatctctaaaattacaggcttt ccatacatcctcaagaagccaagtaagtatagagtgtaataataagtaga aaatatctgaaaatagtaagtaaatgaatataaaataaacagctcataca ctgagacttcctctacacaaggcaacaacatcttgaggcatctacttctt cttgcctgatgattcacgtgctgcatatgctactcttccatgactgagca actattttattatcagggtgactgttggcattttttttgtaatcatatac catttaataatgatctcaaaatgaatgaattgttttattgacaatttgca taaaccaaaaagacacctgtcttagatggggttttactgctgtgaagaga caccatcaccaattcaatgcttataaggacaacatttaattggggctggc ttacaggttcagagattcagtccattatcatcaaagcacgagcatagcag tgtccaggtaggcatggtgctggaggaactcagagatcttcatcttaagg ctgcttagagaagactgacttccaagcagctaggatgggggtctttaagc ccacgcccactgagacatacctactccaacagggccacacttccaatagt gcactccctggcagcacattcaactacacacactttcttactaaaacagc aaacaaacaaaaagatgggttacttgagaa
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chrX_14847473_14848459
seq2: B6Ng01-004G03.g_65_1046

seq1  GAATTCTCACTGAGTGCTTTTACAAAACACCTTATAAAGATGCTTGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTGAGTGCTTTTACAAAACACCTTATAAAGATGCTTGGGAA  50

seq1  AATCATCCATTTGCAAACCAAGAAGAATGACTTCACTACAAAACCAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCCATTTGCAAACCAAGAAGAATGACTTCACTACAAAACCAAATC  100

seq1  TGGTACTAGATATCTGCCCTCTGAACTATGAAAAAATGAACCATTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTAGATATCTGCCCTCTGAACTATGAAAAAATGAACCATTTTTCT  150

seq1  GTTGTGTTTTTGAGACACAGGCTAAGCAAGAAATTATAAATCTGCCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTTTGAGACACAGGCTAAGCAAGAAATTATAAATCTGCCTCCA  200

seq1  TTTACTAGGTGTTGGATTTTTATGTGTGTGCCACTATAGATGACAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGGTGTTGGATTTTTATGTGTGTGCCACTATAGATGACAGAAAA  250

seq1  TAAATGATTTTTTTAAATTTGGTCTATGGTATTTTGATATGGCATTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATTTTTTTAAATTTGGTCTATGGTATTTTGATATGGCATTAACC  300

seq1  AGAGTTATTAGGGACAGACAGGCTATAGCATCTCTAAAATTACAGGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATTAGGGACAGACAGGCTATAGCATCTCTAAAATTACAGGCTTT  350

seq1  CCATACATCCTCAAGAAGCCAAGTAAGTATAGAGTGTAATAATAAGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACATCCTCAAGAAGCCAAGTAAGTATAGAGTGTAATAATAAGTAGA  400

seq1  AAATATCTGAAAATAGTAAGTAAATGAATATAAAATAAACAGCTCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTGAAAATAGTAAGTAAATGAATATAAAATAAACAGCTCATACA  450

seq1  CTGAGACTTCCTCTACACAAGGCAACAACATCTTGAGGCATCTACTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTTCCTCTACACAAGGCAACAACATCTTGAGGCATCTACTTCTT  500

seq1  CTTGCCTGATGATTCACGTGCTGCATATGCTACTCTTCCATGACTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGATGATTCACGTGCTGCATATGCTACTCTTCCATGACTGAGCA  550

seq1  ACTATTTTATTATCAGGGTGACTGTTGGCATTTTTTTTGTAATCATATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTATTATCAGGGTGACTGTTGGCATTTTTTTTGTAATCATATAC  600

seq1  CATTTAATAATGATCTCAAAATGAATGAATTGTTTTATTGACAATTTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATAATGATCTCAAAATGAATGAATTGTTTTATTGACAATTTGCA  650

seq1  TAAACCAAAAAGACACCTGTCTTAGATGGGGTTTTACTGCTGTGAAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAAAAAGACACCTGTCTTAGATGGGGTTTTACTGCTGTGAAGAGA  700

seq1  CACCATCACCAATTCAATGCTTATAAGGACAACATTTAATTGGGGCTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACCAATTCAATGCTTATAAGGACAACATTTAATTGGGGCTGGC  750

seq1  TTACAGGTTCAGAGATTCAGTCCATTATCATCAAAGCAGGAGCATAGCAG  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTACAGGTTCAGAGATTCAGTCCATTATCATCAAAGCACGAGCATAGCAG  800

seq1  TGTCCAGGTAGGCATGGTGCTGGAGGAACTCAGAGATCTTCATCTTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGTAGGCATGGTGCTGGAGGAACTCAGAGATCTTCATCTTAAGG  850

seq1  CTGCTTAGAGAAGACTGACTTCCAAGCAGCTAGGATGGGGGTCTTTAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGAGAAGACTGACTTCCAAGCAGCTAGGATGGGGGTCTTTAAGC  900

seq1  CCACGCCCACTGAGACATACCTACTCCAACAGGGCCACACCTCCAAATAG  950
      |||||||||||||||||||||||||||||||||||||||| ||| |||||
seq2  CCACGCCCACTGAGACATACCTACTCCAACAGGGCCACACTTCC-AATAG  949

seq1  TGCCACTCCCTGGGCCAAGCACATTCAAACTAC-CACA  987
      || ||||||||||    ||||||||| |||||| ||||
seq2  TG-CACTCCCTGG---CAGCACATTC-AACTACACACA  982

BAC Information

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BAC

BAC End Information

Alignment Information