BAC Information

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BAC

Clone NameB6Ng01-005A05
ChromosomeX (Build37)
Map Location 45,500,918 - 45,656,754
singlet/doubletdoublet
Overlap gene1200013B08Rik, Zdhhc9, Utp14a, LOC637576
Upstream geneEG434775, LOC236775, LOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln, Xpnpep2
Downstream geneBcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005A05.bB6Ng01-005A05.g
ACCDH842268DH842269
length9351,057
definitionDH842268|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A05, 5' end.DH842269|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,500,918 - 45,501,853)(45,655,683 - 45,656,754)
sequence
gaattcaactcaggtgcactgtggggggatgcccccttgtcagaacagtt
cccaggcagtgggcgacaactaagagacaggctgagagcattggggtgtg
catcctgtcccacctctcaggatctgggtggctgccgctttcggctgtac
tctctccacttcagctgcttctgtaagatcgcagtggcgggtaggtggag
aagggtaagatttgtgaatattcacacagggccttgtcaccccacccccc
cacccccgccaaaactaggccccaaaggcttgtcattggctgccactcct
caagagcaaagccacttccccttgctctcaagctcatgagaaaaacagag
actgctatatagaccctggtaggccccaaaccacagcagaatcaagctgg
aagaaaaagtctgagaaagagctgacaccagagtccgcagctacctcagg
tagaggtgccccaaggcctacagaataagaaacccctttcctctctcttg
gctccagttactcagatcctgcatctgggaatccctccaggtttcctcta
gaaaagtctgtggtccacatcctttagtccacacaaactgcacctcaccc
ctgccagggcctctggcagcctccaggaggccagatgagtttgcctttac
atattcaagccccatactataaaaatgcccttaacacaaccaaacctcca
gaagatgtggcattcgtcccaaggcccagagacagtagccagcttcatct
ttgattgccagatgactgaagtcaagtctcttctctttggaaacttgagt
gatgtgatagaaaggaatatacaggacaaaggaagcttctcccttctgtt
tctgcctctttcctccttcagccatgaaaatgtactggagagaagggtca
gaaagtggagttagaatgctcccattctgacatag
gaattcaagaccagcctggtctacagagtgagttccagaacagccaaagc
tacacagagagactccgtctcaaaaacaaaacaaaacaaaacaaaacaac
aaaagaaacaagacaaaaataaaaacagaaaagaaagtaggaaagatctc
aaataaggccatagacaatccagaagaaaataggtgaccatgcttctgat
cttggaagtaggggcaggtgttttaggcgtacaagtaattgaagggacaa
tgatggacgacatagatttagctctataaaaacgtaaaaactgttctctt
tctctcgaaccgggtggcctcagccatgaacaatgcagcaacggccaaga
ttaagcttgggaccttcgcagcaagaagaaggaggagctgttgaaacaag
tggatgatctgaaggtggaactgtcccagctttgtgtccccaaagtgaca
ggcgccgcgttcaagctctctaagatacgagatgtacacacatccatctc
ctgagtcctcatggtctctaaccagactggaaaagaaaacctcaggaaat
tctacaagggcaagaagtatgagcccctggacctgcgacccaagaagact
agagccatgcgttgccagctcaccaaggatgaagagaagctgaagagcaa
gaattggcagtggaagaagcggctgtacccactgtgcaggcaaggtctga
gacgacagtgacaataaagtgcaagactgactggcaacaacacaacaaaa
ggaaaaccaaaaaaacccaacataaaaactttttcattttttaaaattct
gtggatgatgcatgggtgggtatgtgcacatgtatgtgagtgtctgtgaa
ggtcagagacatcagataatcctgcagtggacttcatacaggtagttggt
tgtgagcccttgcggtggtggatggtggaaatcaagacagtcctaatcag
gactgtatgcattctttgtcactgagcatcttctagcttatttaacagtc
tttaaaaaatgtgtgtgtgtcacagaagctagaggtgatgtagatgtcta
gagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_45500918_45501853
seq2: B6Ng01-005A05.b_51_985

seq1  GAATTCAACTCAGGTGCACTGTGGGGGGATGCCCCCTTGTCAGAACAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAGGTGCACTGTGGGGGGATGCCCCCTTGTCAGAACAGTT  50

seq1  CCCAGGCAGTGGGCGACAACTAAGAGACAGGCTGAGAGCATTGGGGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAGTGGGCGACAACTAAGAGACAGGCTGAGAGCATTGGGGTGTG  100

seq1  CATCCTGTCCCACCTCTCAGGATCTGGGTGGCTGCCGCTTTCGGCTGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGTCCCACCTCTCAGGATCTGGGTGGCTGCCGCTTTCGGCTGTAC  150

seq1  TCTCTCCACTTCAGCTGCTTCTGTAAGATCGCAGTGGCGGGTAGGTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCACTTCAGCTGCTTCTGTAAGATCGCAGTGGCGGGTAGGTGGAG  200

seq1  AAGGGTAAGATTTGTGAATATTCACACAGGGCCTTGTCACCCCACCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTAAGATTTGTGAATATTCACACAGGGCCTTGTCACCCCACCCCCC  250

seq1  CACCCCCGCCAAAACTAGGCCCCAAAGGCTTGTCATTGGCTGCCACTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCGCCAAAACTAGGCCCCAAAGGCTTGTCATTGGCTGCCACTCCT  300

seq1  CAAGAGCAAAGCCACTTCCCCTTGCTCTCAAGCTCATGAGAAAAACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCAAAGCCACTTCCCCTTGCTCTCAAGCTCATGAGAAAAACAGAG  350

seq1  ACTGCTATATAGACCCTGGTAGGCCCCAAACCACAGCAGAATCAAGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATATAGACCCTGGTAGGCCCCAAACCACAGCAGAATCAAGCTGG  400

seq1  AAGAAAAAGTCTGAGAAAGAGCTGACACCAGAGTCCGCAGCTACCTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGTCTGAGAAAGAGCTGACACCAGAGTCCGCAGCTACCTCAGG  450

seq1  TAGAGGTGCCCCAAGGCCTACAGAATAAGAAACCCCTTTCCTCTCTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGCCCCAAGGCCTACAGAATAAGAAACCCCTTTCCTCTCTCTTG  500

seq1  GCTCCAGTTACTCAGATCCTGCATCTGGGAATCCCTCCAGGTTTCCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTTACTCAGATCCTGCATCTGGGAATCCCTCCAGGTTTCCTCTA  550

seq1  GAAAAGTCTGTGGTCCACATCCTTTAGTCCACACAAACTGCACCTCACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCTGTGGTCCACATCCTTTAGTCCACACAAACTGCACCTCACCC  600

seq1  CTGCCAGGGCCTCTGGCAGCCTCCAGGAGGCCAGATGAGTTTGCCTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGCCTCTGGCAGCCTCCAGGAGGCCAGATGAGTTTGCCTTTAC  650

seq1  ATATTCAAGCCCCATACTATAAAAATGCCCTTAACACAACCAAACCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAAGCCCCATACTATAAAAATGCCCTTAACACAACCAAACCTCCA  700

seq1  GAAGATGTGGCA-TCGTCCCAAGGCCCAGAGACAGTAGCCAGCTTCATCT  749
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTGGCATTCGTCCCAAGGCCCAGAGACAGTAGCCAGCTTCATCT  750

seq1  TTGATTGCCAGATGACTGAAGTCAAGTCTCTTCCCTTTGGAAACTGAGGT  799
      ||||||||||||||||||||||||||||||||| |||||||||||   ||
seq2  TTGATTGCCAGATGACTGAAGTCAAGTCTCTTCTCTTTGGAAACTTGAGT  800

seq1  GATGTGATAGAAGGGAATATACAGGGACAAAGGAAGCTCCTCCCTCCTGT  849
      |||||||||||| |||||||||| |||||||||||||| |||||| ||||
seq2  GATGTGATAGAAAGGAATATACA-GGACAAAGGAAGCTTCTCCCTTCTGT  849

seq1  TCCTGCCTCTTTTCCTCCTTCAGCCAATGAAAATGTACTGGAGAG-AGGG  898
      | ||||||| ||||||||||||||| ||||||||||||||||||| ||||
seq2  TTCTGCCTC-TTTCCTCCTTCAGCC-ATGAAAATGTACTGGAGAGAAGGG  897

seq1  CAAGAAAGTGGAGTTAGAATGCTCCCATTCTGCCATAG  936
        |||||||||||||||||||||||||||||| |||||
seq2  TCAGAAAGTGGAGTTAGAATGCTCCCATTCTGACATAG  935

seq1: chrX_45655683_45656754
seq2: B6Ng01-005A05.g_69_1125 (reverse)

seq1  CCAGCTCTAGGACATCTGACATCCACTTCTGGCTTCTGTGAACACACACA  50
      ||||||||| ||||||| |||| ||| ||| ||||||||| |||||||||
seq2  CCAGCTCTA-GACATCT-ACAT-CACCTCTAGCTTCTGTG-ACACACACA  46

seq1  CATTTTTTTAAAGACTGTTTAAATAAAGCTAGAAAGATGGCTCAGTGACA  100
      || |||||||||||||| |||||| ||||||| ||||| |||||||||||
seq2  CA-TTTTTTAAAGACTG-TTAAAT-AAGCTAG-AAGAT-GCTCAGTGACA  91

seq1  AAGAATGCATACAGTCCTGAATAGGACCTGTCTTTGATTTCCACCATCCA  150
      |||||||||||||||||||| ||||| ||||| |||||||||||||||||
seq2  AAGAATGCATACAGTCCTGATTAGGA-CTGTC-TTGATTTCCACCATCCA  139

seq1  CCACCGCAAGGGCTCACAACCAACTACCTGTATGAAGTCCACCTGCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  CCACCGCAAGGGCTCACAACCAACTACCTGTATGAAGTCCA-CTGCAGGA  188

seq1  TTATCTGATGTCTCTGACCTTCACAGACACTCACATACATGTGCACATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGATGTCTCTGACCTTCACAGACACTCACATACATGTGCACATAC  238

seq1  CCACCCATGCATCATCCACAGAATTTTTAAAAAATGAAAAAGTTTTTATG  300
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCACCCATGCATCATCCACAGAA-TTTTAAAAAATGAAAAAGTTTTTATG  287

seq1  TTGGGTTTTTTTGGTTTTCCTTTTTGTTGTTGTTGTTGCCAGTCAGTCTT  350
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  TTGGGTTTTTTTGGTTTTCC-TTTTGTTG-TGTTGTTGCCAGTCAGTCTT  335

seq1  GCACTTTATTGTCACTGTCGTCTCAGACCTTGCCTGCACAGTGGGTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTATTGTCACTGTCGTCTCAGACCTTGCCTGCACAGTGGGTACAG  385

seq1  CCGCTTCTTCCACTGCCAATTCTTGCTCTTCAGCTTCTCTTCATCCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTTCTTCCACTGCCAATTCTTGCTCTTCAGCTTCTCTTCATCCTTGG  435

seq1  TGAGCTGGCAACGCATGGCTCTAGTCTTCTTGGGTCGCAGGTCCAGGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGGCAACGCATGGCTCTAGTCTTCTTGGGTCGCAGGTCCAGGGGC  485

seq1  TCATACTTCTTGCCCTTGTAGAATTTCCTGAGGTTTTCTTTTCCAGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCTTGCCCTTGTAGAATTTCCTGAGGTTTTCTTTTCCAGTCTG  535

seq1  GTTAGAGACCATGAGGACTCAGGAGATGGATGTGTGTACATCTCGTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGACCATGAGGACTCAGGAGATGGATGTGTGTACATCTCGTATCT  585

seq1  TAGAGAGCTTGAACGCGGCGCCTGTCACTTTGGGGACACAAAGCTGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCTTGAACGCGGCGCCTGTCACTTTGGGGACACAAAGCTGGGAC  635

seq1  AGTTCCACCTTCAGATCATCCACTTGTTTCAACAGCTCCTCCTTCTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACCTTCAGATCATCCACTTGTTTCAACAGCTCCTCCTTCTTCTT  685

seq1  GCTGCGAAGGTCCCAAGCTTAATCTTGGCCGTTGCTGCATTGTTCATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGAAGGTCCCAAGCTTAATCTTGGCCGTTGCTGCATTGTTCATGGC  735

seq1  TGAGGCCACCCGGTTCGAGAGAAAGAGAACAGTTTTTACGTTTTTATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCACCCGGTTCGAGAGAAAGAGAACAGTTTTTACGTTTTTATAGA  785

seq1  GCTAAATCTATGTCGTCCATCATTGTCCCTTCAATTACTTGTACGCCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCTATGTCGTCCATCATTGTCCCTTCAATTACTTGTACGCCTAA  835

seq1  AACACCTGCCCCTACTTCCAAGATCAGAAGCATGGTCACCTATTTTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGCCCCTACTTCCAAGATCAGAAGCATGGTCACCTATTTTCTTC  885

seq1  TGGATTGTCTATGGCCTTATTTGAGATCTTTCCTACTTTCTTTTCTGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGTCTATGGCCTTATTTGAGATCTTTCCTACTTTCTTTTCTGTTT  935

seq1  TTATTTTTGTCTTGTTTCTTTTGTTGTTTTGTTTTGTTTTGTTTTGTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGTCTTGTTTCTTTTGTTGTTTTGTTTTGTTTTGTTTTGTTTT  985

seq1  TGAGACGGAGTCTCTCTGTGTAGCTTTGGCTGTTCTGGAACTCACTCTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGGAGTCTCTCTGTGTAGCTTTGGCTGTTCTGGAACTCACTCTGT  1035

seq1  AGACCAGGCTGGTCTTGAATTC  1072
      ||||||||||||||||||||||
seq2  AGACCAGGCTGGTCTTGAATTC  1057