BAC Information

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BAC

Clone NameB6Ng01-005P21
ChromosomeX (Build37)
Map Location 128,193,482 - 128,326,004
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665799, LOC670449
Downstream geneLOC245600, EG631264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005P21.bB6Ng01-005P21.g
ACCDH842973DH842974
length1,178915
definitionDH842973|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P21, 5' end.DH842974|Mus musculus domesticus DNA, BAC clone: B6Ng01-005P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,324,826 - 128,326,004)(128,193,482 - 128,194,126)
sequence
gaattcaactagtttaaaatacaaaaaatatgttcatttctttgagataa
ttttattgtgtttcgctttaattttaaggttttgtatgtatattatagac
cctgattatggattatatatatatgcaaataagctatttccagaagtctt
tagttttttcttcaacctttaaagttatttggttgttttaacaacaagaa
aaatttgtgtatgtctaattgatctgatcatacacacacacacacacaca
cacacacacacacacacacacacagagagagagagagagagagagagaga
gaggaaaatttccatcatagtgcttcacattttcctttttatattgttat
gtgataagccaaagtagttttcattcacattgtttaaacaacataattat
ttttttggttttttgttttgtttttttttgttttgttttgtttttggggt
attttcttttttgttttgaaagaatatagacatgtcttgcctcaaattct
cagcataaaccttagtgagagttaaagactctggaaagatacagcttgga
gatttttttttctttcaattccactatgttttaactgggtgacattctga
tagttatttcaccgcttattcttcactgtaggagataaaaatgtttattt
aagaaagtctgtgggacgcttaaaacataaatattgtaactttccattgt
aaggtttaaaacctgcaatacaataaaattaaagtgactactacaatagt
cactttagatttgattaaataataacctggatcatttgtttggcagatgt
atgtgcaaatggctgtacttttggatttaaagtctatcatgtactactta
caagcctcatgtgtatcttcataggttatgtgattattagatatttaacc
ttacagttcactatagcagaaaattatttaacactttactaaagtgccca
tctctggattagtagttgggagtaaaaaaaaaaaaaaaaagaataaaacc
aggtgcgttgtaggcgtgttactttggaggacccatttaaggaatttaaa
gtggaggcactcatttttttcctcttaaacctgcaaagaactaaccgagc
aatcaaattaaaagtatattttcactccagtttactttgacaaatgatac
ttcgaagttctttattgctaaggttaga
gaattcatgaatagtgagacatttaataaaatagtactttatattatatt
tttacttgtgattttatgacaaagataatatgtagaaaataatttcaatt
tttgcttttattgtgcatttccaaatgggttattgaaaatacctcacacc
atgcctgacctaaagctgtactacagagcagtagtgataaactggtatag
ctacagacaagtagaccaatggaatagaattgaagacccagatataaacc
cacacacctatggtcacttgatctttgacaagggagctaaaaccattcag
tggaaaaaagacagcattttcaacaaatgctgctggcacaactggcggtt
atcatgtagaaaatgcaaattgatccattcctatctccttgtaataaggt
caaaactaagtggatcaaggaactccacataaaaccagagacagtgaaga
ttatagaggagaaagtggggaaaagcctggaaggtatgggcacaggggaa
aaattcctgaatagaacagcagtggcttgtgccataagatcaagaatcaa
caaatgggacctcataaaattgcaaagcttctgtaaggcaaaagacaccg
tcaataagacaaaaaggccaccaacagattggggaaggacctttacctat
cctaaatcatataggggactaataaccaatatatataaagaaatcaagaa
ggtggactccagaaaatcaaataactccattaaaaaatggggctcagagc
taaacaaagattctcacctgaagaataccgaatgactgagaagcacctga
aaaaatgttcagcatccttaatcaccagggaaatgcaaatcaaaacaacc
ctgagatttcatcttacaccagtcagaatggctaagatcaaaaattcacg
ttactccagatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_128324826_128326004
seq2: B6Ng01-005P21.b_48_1225 (reverse)

seq1  TCTAAC-----AAATAAAGAACAATCTGAGGTATCATTTGTCAAAATGTA  45
      ||||||      ||||||||||  |  || |||||||||||||||  |||
seq2  TCTAACCTTAGCAATAAAGAAC--TTCGAAGTATCATTTGTCAAA--GTA  46

seq1  AAAATTTTTGAGTGATAATTATTACCTTTTATTTTGTTTTGTTTTGTTTT  95
      ||     | |||||| || |||   |||||| ||||  ||| |  |  ||
seq2  AA----CTGGAGTGA-AAATAT--ACTTTTAATTTG-ATTGCTCGG--TT  86

seq1  AG-TCTTTGCAGTATAAAGA-GAAAAAAATGAGTGCCTTCACTTTTAAAT  143
      || |||||||||  | |||| ||||||||||||||||| |||||| || |
seq2  AGTTCTTTGCAGGTTTAAGAGGAAAAAAATGAGTGCCTCCACTTTAAATT  136

seq1  CC-TAAATGGCTCCTC--AAGT-ACACGCCTAC-ACGCACCTGGTTTTAT  188
      || ||||||| |||||  |||| |||||||||| ||||||||||||||||
seq2  CCTTAAATGGGTCCTCCAAAGTAACACGCCTACAACGCACCTGGTTTTAT  186

seq1  TC-TTTTTTTTTTTTTTTTACTCCCAACTACTTAATCCAGAGATGGGCAC  237
      || |||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTTACTCCCAACTAC-TAATCCAGAGATGGGCAC  235

seq1  -TTAGTAAAGTGTTAAATAATTTTCTGCTATAGTGAACTGTAAGGTTAAA  286
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAAAGTGTTAAATAATTTTCTGCTATAGTGAACTGTAAGGTTAAA  285

seq1  TATCTAATAATCACATAACCTATGAAGATACACATGAGGCTTGTAAGTAG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATAATCACATAACCTATGAAGATACACATGAGGCTTGTAAGTAG  335

seq1  TACATGATAGACTTTAAATCCAAAAGTACAGCCATTTGCACATACATCTG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATAGACTTTAAATCCAAAAGTACAGCCATTTGCACATACATCTG  385

seq1  CCAAACAAATGATCCAGGTTATTATTTAATCAAATCTAAAGTGACTATTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAAATGATCCAGGTTATTATTTAATCAAATCTAAAGTGACTATTG  435

seq1  TAGTAGTCACTTTAATTTTATTGTATTGCAGGTTTTAAACCTTACAATGG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTCACTTTAATTTTATTGTATTGCAGGTTTTAAACCTTACAATGG  485

seq1  AAAGTTACAATATTTATGTTTTAAGCGTCCCACAGACTTTCTTAAATAAA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTACAATATTTATGTTTTAAGCGTCCCACAGACTTTCTTAAATAAA  535

seq1  CATTTTTATCTCCTACAGTGAAGAATAAGCGGTGAAATAACTATCAGAAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATCTCCTACAGTGAAGAATAAGCGGTGAAATAACTATCAGAAT  585

seq1  GTCACCCAGTTAAAACATAGTGGAATTGAAAGAAAAAAAAATCTCCAAGC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCAGTTAAAACATAGTGGAATTGAAAGAAAAAAAAATCTCCAAGC  635

seq1  TGTATCTTTCCAGAGTCTTTAACTCTCACTAAGGTTTATGCTGAGAATTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTTCCAGAGTCTTTAACTCTCACTAAGGTTTATGCTGAGAATTT  685

seq1  GAGGCAAGACATGTCTATATTCTTTCAAAACAAAAAAGAAAATACCCCAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGACATGTCTATATTCTTTCAAAACAAAAAAGAAAATACCCCAA  735

seq1  AAACAAAACAAAACAAAAAAAAACAAAACAAAAAACCAAAAAAATAATTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAAAAAAACAAAACAAAAAACCAAAAAAATAATTA  785

seq1  TGTTGTTTAAACAATGTGAATGAAAACTACTTTGGCTTATCACATAACAA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTAAACAATGTGAATGAAAACTACTTTGGCTTATCACATAACAA  835

seq1  TATAAAAAGGAAAATGTGAAGCACTATGATGGAAATTTTCCTCTCTCTCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAGGAAAATGTGAAGCACTATGATGGAAATTTTCCTCTCTCTCT  885

seq1  CTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  935

seq1  GTGTGTGTGTGTATGATCAGATCAATTAGACATACACAAATTTTTCTTGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTATGATCAGATCAATTAGACATACACAAATTTTTCTTGT  985

seq1  TGTTAAAACAACCAAATAACTTTAAAGGTTGAAGAAAAAACTAAAGACTT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAACAACCAAATAACTTTAAAGGTTGAAGAAAAAACTAAAGACTT  1035

seq1  CTGGAAATAGCTTATTTGCATATATATATAATCCATAATCAGGGTCTATA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATAGCTTATTTGCATATATATATAATCCATAATCAGGGTCTATA  1085

seq1  ATATACATACAAAACCTTAAAATTAAAGCGAAACACAATAAAATTATCTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATACAAAACCTTAAAATTAAAGCGAAACACAATAAAATTATCTC  1135

seq1  AAAGAAATGAACATATTTTTTGTATTTTAAACTAGTTGAATTC  1179
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGAACATATTTTTTGTATTTTAAACTAGTTGAATTC  1178

seq1: chrX_128193482_128194126
seq2: B6Ng01-005P21.g_68_712

seq1  GAATTCATGAATAGTGAGACATTTAATAAAATAGTACTTTATATTATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATAGTGAGACATTTAATAAAATAGTACTTTATATTATATT  50

seq1  TTTACTTGTGATTTTATGACAAAGATAATATGTAGAAAATAATTTCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTGTGATTTTATGACAAAGATAATATGTAGAAAATAATTTCAATT  100

seq1  TTTGCTTTTATTGTGCATTTCCAAATGGGTTATTGAAAATACCTCACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTTATTGTGCATTTCCAAATGGGTTATTGAAAATACCTCACACC  150

seq1  ATGCCTGACCTAAAGCTGTACTACAGAGCAGTAGTGATAAACTGGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGACCTAAAGCTGTACTACAGAGCAGTAGTGATAAACTGGTATAG  200

seq1  CTACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGATATAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGATATAAACC  250

seq1  CACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATTCAG  300

seq1  TGGAAAAAAGACAGCATTTTCAACAAATGCTGCTGGCACAACTGGCGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAGACAGCATTTTCAACAAATGCTGCTGGCACAACTGGCGGTT  350

seq1  ATCATGTAGAAAATGCAAATTGATCCATTCCTATCTCCTTGTAATAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTAGAAAATGCAAATTGATCCATTCCTATCTCCTTGTAATAAGGT  400

seq1  CAAAACTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACAGTGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAAGTGGATCAAGGAACTCCACATAAAACCAGAGACAGTGAAGA  450

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTGGAAGGTATGGGCACAGGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGGAGAAAGTGGGGAAAAGCCTGGAAGGTATGGGCACAGGGGAA  500

seq1  AAATTCCTGAATAGAACAGCAGTGGCTTGTGCCATAAGATCAAGAATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTGAATAGAACAGCAGTGGCTTGTGCCATAAGATCAAGAATCAA  550

seq1  CAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGACACCG  600

seq1  TCAATAAGACAAAAAGGCCACCAACAGATTGGGGAAGGACCTTTA  645
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGACAAAAAGGCCACCAACAGATTGGGGAAGGACCTTTA  645