BAC Information

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BAC

Clone NameB6Ng01-008D05
ChromosomeX (Build37)
Map Location 46,624,045 - 46,759,495
singlet/doubletdoublet
Overlap geneEnox2
Upstream geneUtp14a, LOC637576, Bcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295
Downstream gene1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323, EG665816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008D05.bB6Ng01-008D05.g
ACCDH844538DH844539
length1,137157
definitionDH844538|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D05, 5' end.DH844539|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,758,357 - 46,759,495)(46,624,045 - 46,624,201)
sequence
gaattcttataactcaattatatgaagacaaaataaagttttttaaaatg
gacttaagattaagatagacatttcacaaaagaagaaaaacagatggcaa
atatttgcacatgaaaagatgctcaacatcgttagtcattaaagaaatgc
aaatcaaatccacaatgagcttcaactatacacccattaatctgtcgaaa
atgcagatgactgaccatagattatctgggaggattgtcaacagttagct
ccttcatttatggaagaatatgaaaaactgcatccattttggcaagcaac
ctggtattttcttttatttagctagttttctaaattgaaatggttggttg
ttttggagaattttgtatttggatgctgtattcataccctcccacttctt
ccttctaccccatcactccccccatataaccctgctctcttaaactcaat
actatatcttcattagtagatatgattaagtattttcttttaaaaattaa
agatatatttgctttataatctactcagttctctcctatgtagttacccc
taaaacaaaggatttatttgtccaacaacccacaaacgtttattttagcc
ttgatttaatacttccagttttaaataatcacctggttattgccatgtaa
gtggatacatattgtatgtatccatatttgaataataagattcacctgaa
aatatagattcacctgagaaatttagtatacaattgcttatgtacaaaaa
tatgagtgattatagaaacaaaatagatttaaaaaaacataaaatgtggt
agtaaagaaatgactgggttcataagaaaggggattcttttttcggtgtc
tctgtgaccagatcatgcatacagaccttgcagtcaaagaaaaagatgta
gtcatagaacgactctttgctagtacacatataatattttaaataattat
aataaacatcaatgctggctttcatcttctacatgaatacttatgacaca
aagaagaatgcaattgtagcagctttgatattataagtacagatgtttaa
aggatggagggaaaggcaatggaagttaagttctcttatacagatgaagt
tgaagaattctgttggaaacagaaaggccattatgac
ctaacaaatctttaaacagcattcccttctttggtggtacacaaagtatg
gcttttcattacaacaagcaaattgaaaaatctatttgataactttaaaa
ggatagtaagactgacaagagaggagtgaggaatgcagggaggaagggag
gatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_46758357_46759495
seq2: B6Ng01-008D05.b_44_1180 (reverse)

seq1  GTCATAAATGGCCCTTTCTGTTCACAACAGATATCTTCAACTTTCTACTG  50
      ||||| ||||| ||||||||||  |||||||  |||||||| |||  |||
seq2  GTCAT-AATGG-CCTTTCTGTTTCCAACAGAATTCTTCAAC-TTCATCTG  47

seq1  TATAAGGACACTATAACTTCCATTTGCCTTTCCCTCCTTCCTTTAACCTT  100
      ||||||   ||| ||||||||| |||||||||||||| |||||||| | |
seq2  TATAAGAGAACT-TAACTTCCA-TTGCCTTTCCCTCCATCCTTTAAACAT  95

seq1  CTGTACTT-TTATATCAATGCTGCTACAATTTGCATTCTTCTTTGTGTCA  149
      |||||||| | ||||||| |||||||||| ||||||||||||||||||||
seq2  CTGTACTTATAATATCAAAGCTGCTACAA-TTGCATTCTTCTTTGTGTCA  144

seq1  TAAGTATTCATGTAGAAGATGAAAGGCTAGCATTGATG-TTATTATAATT  198
      |||||||||||||||||||||||| || |||||||||| |||||||||||
seq2  TAAGTATTCATGTAGAAGATGAAA-GCCAGCATTGATGTTTATTATAATT  193

seq1  ATTT-AAATATTATATGTGTACTAGCAAAGAGTCGTTCTATGACTACATC  247
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATATTATATGTGTACTAGCAAAGAGTCGTTCTATGACTACATC  243

seq1  TTTTTCTTTGACTGCAAGGTCTGTATGCATGATCTGGTCACAGAGACACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGACTGCAAGGTCTGTATGCATGATCTGGTCACAGAGACACC  293

seq1  G-AAAAAGAATCCCCTTTCTTATGAA-CCAGTCATTTCTTTACTACCACA  345
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAAAAAGAATCCCCTTTCTTATGAACCCAGTCATTTCTTTACTACCACA  343

seq1  TTTTATGTTTTTTTAAATCTATTTTGTTTCTATAATCACTCATATTTTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTTTTTTTAAATCTATTTTGTTTCTATAATCACTCATATTTTTG  393

seq1  TACATAAGCAATTGTATACTAAATTTCTCAGGTGAATCTATATTTTCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGCAATTGTATACTAAATTTCTCAGGTGAATCTATATTTTCAGG  443

seq1  TGAATCTTATTATTCAAATATGGATACATACAATATGTATCCACTTACAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTATTATTCAAATATGGATACATACAATATGTATCCACTTACAT  493

seq1  GGCAATAACCAGGTGATTATTTAAAACTGGAAGTATTAAATCAAGGCTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAACCAGGTGATTATTTAAAACTGGAAGTATTAAATCAAGGCTAA  543

seq1  AATAAACGTTTGTGGGTTGTTGGACAAATAAATCCTTTGTTTTAGGGGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACGTTTGTGGGTTGTTGGACAAATAAATCCTTTGTTTTAGGGGTA  593

seq1  ACTACATAGGAGAGAACTGAGTAGATTATAAAGCAAATATATCTTTAATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATAGGAGAGAACTGAGTAGATTATAAAGCAAATATATCTTTAATT  643

seq1  TTTAAAAGAAAATACTTAATCATATCTACTAATGAAGATATAGTATTGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAAATACTTAATCATATCTACTAATGAAGATATAGTATTGAG  693

seq1  TTTAAGAGAGCAGGGTTATATGGGGGGAGTGATGGGGTAGAAGGAAGAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGAGCAGGGTTATATGGGGGGAGTGATGGGGTAGAAGGAAGAAG  743

seq1  TGGGAGGGTATGAATACAGCATCCAAATACAAAATTCTCCAAAACAACCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGTATGAATACAGCATCCAAATACAAAATTCTCCAAAACAACCA  793

seq1  ACCATTTCAATTTAGAAAACTAGCTAAATAAAAGAAAATACCAGGTTGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCAATTTAGAAAACTAGCTAAATAAAAGAAAATACCAGGTTGCT  843

seq1  TGCCAAAATGGATGCAGTTTTTCATATTCTTCCATAAATGAAGGAGCTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAATGGATGCAGTTTTTCATATTCTTCCATAAATGAAGGAGCTAA  893

seq1  CTGTTGACAATCCTCCCAGATAATCTATGGTCAGTCATCTGCATTTTCGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGACAATCCTCCCAGATAATCTATGGTCAGTCATCTGCATTTTCGA  943

seq1  CAGATTAATGGGTGTATAGTTGAAGCTCATTGTGGATTTGATTTGCATTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAATGGGTGTATAGTTGAAGCTCATTGTGGATTTGATTTGCATTT  993

seq1  CTTTAATGACTAACGATGTTGAGCATCTTTTCATGTGCAAATATTTGCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGACTAACGATGTTGAGCATCTTTTCATGTGCAAATATTTGCCA  1043

seq1  TCTGTTTTTCTTCTTTTGTGAAATGTCTATCTTAATCTTAAGTCCATTTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTTCTTCTTTTGTGAAATGTCTATCTTAATCTTAAGTCCATTTT  1093

seq1  AAAAAACTTTATTTTGTCTTCATATAATTGAGTTATAAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTTTATTTTGTCTTCATATAATTGAGTTATAAGAATTC  1137

seq1: chrX_46624045_46624201
seq2: B6Ng01-008D05.g_74_230

seq1  CTAACAAATCTTTAAACAGCATTCCCTTCTTTGGTGGTACACAAAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAATCTTTAAACAGCATTCCCTTCTTTGGTGGTACACAAAGTATG  50

seq1  GCTTTTCATTACAACAAGCAAATTGAAAAATCTATTTGATAACTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCATTACAACAAGCAAATTGAAAAATCTATTTGATAACTTTAAAA  100

seq1  GGATAGTAAGACTGACAAGAGAGGAGTGAGGAATGCAGGGAGGAAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTAAGACTGACAAGAGAGGAGTGAGGAATGCAGGGAGGAAGGGAG  150

seq1  GATGGGA  157
      |||||||
seq2  GATGGGA  157