BAC Information

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BAC

Clone NameB6Ng01-013D18
ChromosomeX (Build37)
Map Location 40,331,279 - 40,332,433
singlet/doubletsinglet
Overlap geneOdz1
Upstream geneLOC100039838, Birc4, Stag2, LOC100039899, Sh2d1a
Downstream geneGm362, LOC100039977, LOC100039987
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013D18.bB6Ng01-013D18.g
ACCDH848106DH848107
length1,142215
definitionDH848106|Mus musculus domesticus DNA, BAC clone: B6Ng01-013D18, 5' end.DH848107|Mus musculus domesticus DNA, BAC clone: B6Ng01-013D18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagcttcagcctatgctcaaataacctatacatacattcctga
tacctggtctcctcctaaatctcgttatcatttgggagtaagtgtgagta
agtgcatagtgacttcgcttgtctttgtttgtttgtttgtttatagatat
gttttattatttaaaccaatttccatgtatagaatgctttattttatatt
tccattattccatctcattggaaaggcagaaaattcatagcacattaaaa
atgaattgtctggtaactgttgaagtttaaaagtataatttttttcttgc
catgcttttatttatttccatcattctttgcttgatcctcttattcttaa
aatgcatttttttctattgagtgtaatacctaggctaactcatcctgaca
tttcaaaacaatacaaaagagaaataaagagaagaattatatgttttatg
attcaagtgtattagagcccgtacaccttgttctttttaatcctagaaat
tctatcatagtctttcatttgtttctttttagtttgtatttgcacacgta
cacacacacacacatacacacgcatacacacacacatacatacacacata
cacacacatacacacatatacacacacacacacacacacatacacacaca
catctacaaaacaaaaagaacctatgaatttaacctattccgttcatgtg
ttttctcttatcacaaacattttgaaggaaaacactgattttctctatcc
cctccctcctctatctaccacctgctttctctctttccctttttctttct
tcttttcctttctttttctatgaaaaggatcaaagttgggatgttttgtt
tgctaggcaagcacttcagtgcaatgaggtgagttctcagtattgtggca
ctcaataaacactgaagcattgcttgccgcaaacagctgatcagtataat
atcatcaatcttttgtcattttgtccactttgccatctctaaattcagtc
actagaatcatactactggagtattccctgcattagtacacaaaatatcc
tataatttgagactcttaataatcactttagcttctttctgtcacctcct
caccacctgtaactagaatacctttcagcactgagtctgaca
caagattgctgagtatattttcagtaaattctttagaaaaacacatggtg
ggactcatggctctagctgcatatgtagcagaggatggcctagtcggcca
tcattgggaggagagggcctaggtcctgtgaacgttctatgccctagtat
atatagggaagtgccagggccagtaagctgtagtgggtgggttggtgaac
agtgggagggtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_40331279_40332433
seq2: B6Ng01-013D18.b_42_1183

seq1  GAATTCAAAGCTTCAGCCTATGCTCAAATAACCTATACATACATTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCTTCAGCCTATGCTCAAATAACCTATACATACATTCCTGA  50

seq1  TACCTGGTCTCCTCCTAAATCTCGTTATCATTTGGGAGTAAGTGTGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTCTCCTCCTAAATCTCGTTATCATTTGGGAGTAAGTGTGAGTA  100

seq1  AGTGCATAGTGACTTCGCTTGTCTTTGTTTGTTTGTTTGTTTATAGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATAGTGACTTCGCTTGTCTTTGTTTGTTTGTTTGTTTATAGATAT  150

seq1  GTTTTATTATTTAAACCAATTTCCATGTATAGAATGCTTTATTTTATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTATTTAAACCAATTTCCATGTATAGAATGCTTTATTTTATATT  200

seq1  TCCATTATTCCATCTCATTGGAAAGGCAGAAAATTCATAGCACATTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTCCATCTCATTGGAAAGGCAGAAAATTCATAGCACATTAAAA  250

seq1  ATGAATTGTCTGGTAACTGTTGAAGTTTAAAAGTATAATTTTTTTCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGTCTGGTAACTGTTGAAGTTTAAAAGTATAATTTTTTTCTTGC  300

seq1  CATGCTTTTATTTATTTCCATCATTCTTTGCTTGATCCTCTTATTCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTATTTATTTCCATCATTCTTTGCTTGATCCTCTTATTCTTAA  350

seq1  AATGCATTTTTTTCTATTGAGTGTAATACCTAGGCTAACTCATCCTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTTTTTCTATTGAGTGTAATACCTAGGCTAACTCATCCTGACA  400

seq1  TTTCAAAACAATACAAAAGAGAAATAAAGAGAAGAATTATATGTTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACAATACAAAAGAGAAATAAAGAGAAGAATTATATGTTTTATG  450

seq1  ATTCAAGTGTATTAGAGCCCGTACACCTTGTTCTTTTTAATCCTAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTGTATTAGAGCCCGTACACCTTGTTCTTTTTAATCCTAGAAAT  500

seq1  TCTATCATAGTCTTTCATTTGTTTCTTTTTAGTTTGTATTTGCACACGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATAGTCTTTCATTTGTTTCTTTTTAGTTTGTATTTGCACACGTA  550

seq1  CACACACACACACATACACACGCATACACACACACATACATACACACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACATACACACGCATACACACACACATACATACACACATA  600

seq1  CACACACATACACACATATACACACACACACACACACACATACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATACACACATATACACACACACACACACACACATACACACACA  650

seq1  CATCTAC-AAACAAAAAGAACCTATGAATTTAACCTATTCCGTTCATGTG  699
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAAAACAAAAAGAACCTATGAATTTAACCTATTCCGTTCATGTG  700

seq1  TTTTCTCTTATCACAAACATTTTGAAGGAAAACACTGATTTTCTCTATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTATCACAAACATTTTGAAGGAAAACACTGATTTTCTCTATCC  750

seq1  CTTCCCTCCTCTATCTACCACCTGCTTTCTCTCTTTCCTTTTTTCTTTCT  799
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTCCCTCCTCTATCTACCACCTGCTTTCTCTCTTTCCCTTTTTCTTTCT  800

seq1  TCTTTTCCTTTCTTTTTCTATGAAAGGGATCAAAGTTGGGATGTTTTGTT  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTTTTCCTTTCTTTTTCTATGAAAAGGATCAAAGTTGGGATGTTTTGTT  850

seq1  TGCTAGGCAAGCACTTCAGTGCAATGAGGTGAGTTCTCAGTATTGTGGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGCAAGCACTTCAGTGCAATGAGGTGAGTTCTCAGTATTGTGGCA  900

seq1  CTCAATAAACACTGAAGCATTGCTTGCCGGCAAACAGCTGATCAGTTATA  949
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  CTCAATAAACACTGAAGCATTGCTTGCC-GCAAACAGCTGATCAG-TATA  948

seq1  TTATCATCAATCTTTTGTTCATTTTGTCCACTTTGCCATCTCTAAATTCA  999
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATATCATCAATCTTTTG-TCATTTTGTCCACTTTGCCATCTCTAAATTCA  997

seq1  GTCACTAG-ATCATACTACTGAGAGGTATCCCTGCATTAGTACAC-AAAT  1047
      |||||||| |||||||||||| |||   ||||||||||||||||| ||||
seq2  GTCACTAGAATCATACTACTG-GAGTATTCCCTGCATTAGTACACAAAAT  1046

seq1  ATCTTATAATTTGAGACTTCCTTAATTTAATCCACCTTTAGCTTCTTTCT  1097
      ||| ||||||||||||||  |||||  |||||   |||||||||||||||
seq2  ATCCTATAATTTGAGACT--CTTAA--TAATC--ACTTTAGCTTCTTTCT  1090

seq1  GTCCACCTCCTCACCCACACTGTAACTAGAATATACTTTCTAGCAACTAA  1147
      || |||||||||| |||| ||||||||||||||  ||||| ||| ||| |
seq2  GT-CACCTCCTCA-CCAC-CTGTAACTAGAATA-CCTTTC-AGC-ACTGA  1134

seq1  GTCTGACA  1155
      ||||||||
seq2  GTCTGACA  1142