BAC Information

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BAC

Clone NameB6Ng01-013P19
ChromosomeX (Build37)
Map Location 106,247,763 - 106,248,666
singlet/doubletsinglet
Overlap genenone
Upstream geneGm378, LOC668516, Gm379, Brwd3, 5730416F02Rik, Nsbp1
Downstream geneSh3bgrl, EG622976, LOC100042831, LOC213474, LOC245573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013P19.bB6Ng01-013P19.g
ACCDH848661DH848662
length760919
definitionDH848661|Mus musculus domesticus DNA, BAC clone: B6Ng01-013P19, 5' end.DH848662|Mus musculus domesticus DNA, BAC clone: B6Ng01-013P19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccgtactactcagctattaaaaagaa
tgaatttatgaaattcctaggcaaatggatggacctggagggcatcatca
tgagtgaggtaacccaatcataaaagaactcacacaatatgtactcactg
ataagtggatattagcccagaaacttagaatacccaagatataggataca
atttgctaaacacatgaaactcaagaagaacgaagaccaaagtgtggaca
ctttgccccttcttagaattgggaacaaaacacccatggaaggaggtaca
gagacacagtttggagctgagacgaaaggatggaccatctagagattgca
atatccggagatccatcccataatcagcttccaaacgctgacaccattgc
acacactagcaagattttgctgaaaggaccctgatatagctgtctcttgt
gagactatgctggggcctagcaaacacagaagtggatacttacagtcagc
tatttgatggatcacagggcccccaatggaggagctagagaaagcattca
atgagctaaagggatctgcaaccctataggtggaacaacattatgaacta
accagtatcccagagctcttgtctctagctgcatatgtatgaaaagatgg
cctagttggccatcactggaaagagaggcccattggacttgcaaacttta
tatgccccagtacaggggaatgccagggccaagaaagtgggagtgggtgg
atggaggagt

gaattcatagttcacagggaaaaaagtatatatttctcatacatataaaa
atgttcaatttcagttgtaatgaaatacatactagaccacaataagggag
ctttcagcacttaccttcagaacacgcgtacccatgtaatttggcagtat
tttaaaaaaatactgatttttttctttgattaaacaattacactgaaaat
ttacatctatagagataccttatatatgaattcaaaactatttgtggctg
tattgaagcagtaaaacattggaactataacttgcttcttggcttattct
tcaaagaatgaatgtatttaataaagagtgagaactttctatgtctctat
atgaaatggcaaaaaaaggctcacattataaagctgaatgggcaaaaaaa
gtaaggacaagtcccttccgctcgcctcgagccccgggcttccttgccag
cagagtcttgcccaacacccgcaagggcccacacgggactccccacggga
ccctaagacctctggcgagtggaacacagcgcctgccccaatccaatcgc
gcggaacttgagactgcggtacatagggaagcaggctacccgggcctgat
ctggggcacaagtcccttccgctcgactcgagccccgggctaccttgcca
gcagagtcttgcccaacacccgcaagagccacacgggactccccacggga
tcctaagacctctggtgagtggaacacagcgcctgccccaatccaatcgc
gcggaacttgagactgcggtacatagggaagcagctacccgggcttgatc
tggggcacaaaccctttccactccactcgagcccgggctaccttgccagc
tgagtcgcaagggccacacaggattcacacgtgatcctaagacctctagt
gagtggacacacttctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106247763_106248666
seq2: B6Ng01-013P19.g_67_966

seq1  GAATTCATAGTTCACAGGGAAAAAAGTATATATTTCTCATACATATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTTCACAGGGAAAAAAGTATATATTTCTCATACATATAAAA  50

seq1  ATGTTCAATTTCAGTTGTAATGAAATACATACTAGACCACAATAAGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAATTTCAGTTGTAATGAAATACATACTAGACCACAATAAGGGAG  100

seq1  CTTTCAGCACTTACCTTCAGAACACGCGTACCCATGTAATTTGGCAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGCACTTACCTTCAGAACACGCGTACCCATGTAATTTGGCAGTAT  150

seq1  TTTAAAAAAATACTGATTTTTTTCTTTGATTAAACAATTACACTGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAATACTGATTTTTTTCTTTGATTAAACAATTACACTGAAAAT  200

seq1  TTACATCTATAGAGATACCTTATATATGAATTCAAAACTATTTGTGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTATAGAGATACCTTATATATGAATTCAAAACTATTTGTGGCTG  250

seq1  TATTGAAGCAGTAAAACATTGGAACTATAACTTGCTTCTTGGCTTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGCAGTAAAACATTGGAACTATAACTTGCTTCTTGGCTTATTCT  300

seq1  TCAAAGAATGAATGTATTTAATAAAGAGTGAGAACTTTCTATGTCTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAATGAATGTATTTAATAAAGAGTGAGAACTTTCTATGTCTCTAT  350

seq1  ATGAAATGGCAAAAAAAGGCTCACATTATAAAGCTGAATGGGCAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGGCAAAAAAAGGCTCACATTATAAAGCTGAATGGGCAAAAAAA  400

seq1  GTAAGGACAAGTCCCTTCCGCTCGCCTCGAGCCCCGGGCTTCCTTGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGACAAGTCCCTTCCGCTCGCCTCGAGCCCCGGGCTTCCTTGCCAG  450

seq1  CAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTTGCCCAACACCCGCAAGGGCCCACACGGGACTCCCCACGGGA  500

seq1  CCCTAAGACCTCTGGCGAGTGGAACACAGCGCCTGCCCCAATCCAATCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGACCTCTGGCGAGTGGAACACAGCGCCTGCCCCAATCCAATCGC  550

seq1  GCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGAT  600

seq1  CTGGGGCACAAGTCCCTTCCGCTCGACTCGAGCCCCGGGCTACCTTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCACAAGTCCCTTCCGCTCGACTCGAGCCCCGGGCTACCTTGCCA  650

seq1  GCAGAGTCTTGCCCAACACCCGCAAGAGCCACACGGGACTCCCCACGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTCTTGCCCAACACCCGCAAGAGCCACACGGGACTCCCCACGGGA  700

seq1  TCCTAAGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGC  750

seq1  GCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCTTGAT  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCGGAACTTGAGACTGCGGTACATAGGGAAGCA-GCTACCCGGGCTTGAT  799

seq1  CTGGGGCACAAACCCCTTCCACTCCACTCGAGCCCCGGGCTACCTTGCCA  850
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  CTGGGGCACAAACCCTTTCCACTCCACTCGAG-CCCGGGCTACCTTGCCA  848

seq1  GCTGAGTCGCAAGGGCCCACACAGGATTCCACACGTGATCCTAAGACCTC  900
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  GCTGAGTCGCAAGGG-CCACACAGGATT-CACACGTGATCCTAAGACCTC  896

seq1  TAGT  904
      ||||
seq2  TAGT  900


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