BAC Information

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BAC

Clone NameB6Ng01-014K07
ChromosomeX (Build37)
Map Location 158,165,826 - 158,166,408
singlet/doubletsinglet
Overlap geneRai2
Upstream geneRs1, Gja6, Scml2, LOC414364, Prkaca-ps1
Downstream geneGm47, Nhs, Reps2, LOC654358, LOC100041557, LOC667630
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K07.bB6Ng01-014K07.g
ACCDH849129DH849130
length577238
definitionDH849129|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K07, 5' end.DH849130|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttctgaagaagaaactccttcttttacatgggtttgatgcagaaccggct
ctctatggtcagagagcaggagagttgagtaatggacttgcagtagcagt
ctcaagacccttgctcgtggtttatttgactttctttttcattccctgtt
taggaagtttaacaaaggctacccttcctgatatactggatccttggaga
taagtacagactacttaatattatggataagcaacatgttcttataagga
ggatggtggcttgagagattcagtggtcaagacttgcagagggccagaat
ttggttcccagcacccatattgggtagttcactctgcttgtaattctaga
tccaggggggatctgatgcccctagtttctgtgggcaaactcacttacat
gcacatatccacacacatacttataactaaaaataaaatatgactatttt
taaattcagaatccatgctggagagagagctcattaaagtacctgagcac
aaggacttcagtgagatccccagaagtcacattctaaagaatcagagcat
ggggaggtgaagtgggggtatatgggg
aagaagctgaggagaagggtaaccctgtaggaggaccagcagtctcaatc
tggacccccaagatgtctcaaaaactggaccaccaaccaggcggcataca
ccagctgatatgaggcccccaacacacatacagcagaggacttccgggtc
tgtgttcactcagagatgatgcacctaactctcaagagactgaaggcccc
agggaatttagaggtcaggtggggtgggggatggggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_158165826_158166408
seq2: B6Ng01-014K07.b_45_627 (reverse)

seq1  CCCCATATACCCCCACTTCACCTCCCCATGCTCTGATTCTTTAGAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATACCCCCACTTCACCTCCCCATGCTCTGATTCTTTAGAATGTG  50

seq1  ACTTCTGGGGATCTCACTGAAGTCCTTGTGCTCAGGTACTTTAATGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGGGATCTCACTGAAGTCCTTGTGCTCAGGTACTTTAATGAGCT  100

seq1  CTCTCTCCAGCATGGATTCTGAATTTAAAAATAGTCATATTTTATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCAGCATGGATTCTGAATTTAAAAATAGTCATATTTTATTTTTA  150

seq1  GTTATAAGTATGTGTGTGGATATGTGCATGTAAGTGAGTTTGCCCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAGTATGTGTGTGGATATGTGCATGTAAGTGAGTTTGCCCACAGA  200

seq1  AACTAGGGGCATCAGATCCCCCCTGGATCTAGAATTACAAGCAGAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGGGCATCAGATCCCCCCTGGATCTAGAATTACAAGCAGAGTGAA  250

seq1  CTACCCAATATGGGTGCTGGGAACCAAATTCTGGCCCTCTGCAAGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAATATGGGTGCTGGGAACCAAATTCTGGCCCTCTGCAAGTCTTG  300

seq1  ACCACTGAATCTCTCAAGCCACCATCCTCCTTATAAGAACATGTTGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGAATCTCTCAAGCCACCATCCTCCTTATAAGAACATGTTGCTTA  350

seq1  TCCATAATATTAAGTAGTCTGTACTTATCTCCAAGGATCCAGTATATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAATATTAAGTAGTCTGTACTTATCTCCAAGGATCCAGTATATCAG  400

seq1  GAAGGGTAGCCTTTGTTAAACTTCCTAAACAGGGAATGAAAAAGAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTAGCCTTTGTTAAACTTCCTAAACAGGGAATGAAAAAGAAAGTC  450

seq1  AAATAAACCACGAGCAAGGGTCTTGAGACTGCTACTGCAAGTCCATTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACCACGAGCAAGGGTCTTGAGACTGCTACTGCAAGTCCATTACT  500

seq1  CAACTCTCCTGCTCTCTGACCATAGAGAGCCGGTTCTGCATCAAACCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCCTGCTCTCTGACCATAGAGAGCCGGTTCTGCATCAAACCCAT  550

seq1  GTAAAAGAAGGAGTTTCTTCTTCAGAAGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  GTAAAAGAAGGAGTTTCTTCTTCAGAAGAATTC  583