BAC Information

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BAC

Clone NameB6Ng01-015M15
ChromosomeX (Build37)
Map Location 153,779,989 - 153,889,001
singlet/doubletdoublet
Overlap genePhex, Gm1947, Sms
Upstream gene4930503H13Rik, LOC640803, LOC434885
Downstream geneLOC100041181, EG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2, EG667483, LOC671033, LOC667487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015M15.bB6Ng01-015M15.g
ACCDH849953DH849954
length7171,031
definitionDH849953|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M15, 5' end.DH849954|Mus musculus domesticus DNA, BAC clone: B6Ng01-015M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,888,287 - 153,889,001)(153,779,989 - 153,781,022)
sequence
gaattctacctctgaccttttatagtttatacccttagactatggctatg
gttttatcactgcctggagacatgataactcttgattcttgccttcttct
tctgcccttggctggaatgtgtaacagaaaaatagagaaggttaataatg
ggatgaggatgttatgtggtgatttgcaaaaactgaatgttcccaccaca
cattgctgtgccacagtggcagatttgtgacatcattggtatcaccccgg
gggcttgaagacagccttgttatatcacagaacttcggagtatgcatttt
tgagagtagaagtaaggtcccgggacttgaccacctaccttctgtctcta
atccccttcttaaatccccctactgtctgttacatacaaaaatgggcatg
taacactacggtgaaaaatgaagcaaactcttgaccattcccataataat
gaactgttcgttatcagtactttttagacatgtataatccacactgaaag
ttactgctttctggaagtaatccattagtatcatttgaaaattttgtttt
ttattaggtgtttgtgagtatgggtgcctgtggagtgcaaaaggggatat
tgaattccctgggagctggagttaaagcatttgtgagctgcctgatatga
atgtggaaaaactgaactccgaggtctctgtactccctgtgtgtgttctt
ttttattttaaatttta
gaattctggaataaaccattctccacactaaataattggcaatggttctg
ttaaaaagaaatgaatatttattatattgtaggtcatacctcatttcctg
aaaaaacacctttggaaaactgttggcaaggctaataaaagatcaatgaa
caccagtgaagtgggcctgaaggttccagccccttccccaaacctcccac
atgtctggaagagggagtgctttcaaatgagtgatgacatttcccattta
tgtgtattattagtcttcagaaaccaaaaccaaaatattaataccaacag
tctaaatctctgttttgcttctataacctctaagtatgtgagcccaagga
agtcacctaagtcttcttaatgatctttccttgtagaacaatgaagctat
tccttacttcacaaggtgattgtgaggttaaaataacaaaagaattaaga
gagtgaactcctaactctctgttgacctctacgcatataaagaatctcac
acagttctgtaatgcttagatacatattttcaaaactctgttctatttta
agtgttgcccttttttttttttcctataaggaaaagaatccctgacctcg
gaaagatgtatggtctgagttcatttctaactcacccatgatgatgcatt
tttaatgacccatcccctcttagctgtaccattaccatggtgattaatga
gagacattcctaagatggctcctgggtcatgcagaaggacaagtagcagt
gtgacatggtgatgctaccaaacctaccaagaacatttcacacgctcatt
tgcatgatcttctgccactgtagatattctgctatgagcaaaatcttgtt
ttgcacatgtataattatagagatgtttgttttatttatataaacattca
gattaccatctcagacattttttgaggcaagttcttagtatgtagcccag
gctgacctggagcccatgatccttatgcctctaattataagtttgccggg
atatcaagcatggtgcgctctgcttggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_153888287_153889001
seq2: B6Ng01-015M15.b_46_762 (reverse)

seq1  TAAAATTTAAAAATAAAAAAGAACACACACAGGGAGTACAGAGACCTCGG  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTT-AAAATAAAAAAGAACACACACAGGGAGTACAGAGACCTCGG  49

seq1  AGTTCAG-TTTTCCACATTCATATCAGGCAGCTCACAAATGC-TTAACTC  98
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  AGTTCAGTTTTTCCACATTCATATCAGGCAGCTCACAAATGCTTTAACTC  99

seq1  CAGCT-CCAGGGAATTCAATATCCCCTTTTGCACTCCACAGGCACCCATA  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCCAGGGAATTCAATATCCCCTTTTGCACTCCACAGGCACCCATA  149

seq1  CTCACAAACACCTAATAAAAAACAAAATTTTCAAATGATACTAATGGATT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAACACCTAATAAAAAACAAAATTTTCAAATGATACTAATGGATT  199

seq1  ACTTCCAGAAAGCAGTAACTTTCAGTGTGGATTATACATGTCTAAAAAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGAAAGCAGTAACTTTCAGTGTGGATTATACATGTCTAAAAAGT  249

seq1  ACTGATAACGAACAGTTCATTATTATGGGAATGGTCAAGAGTTTGCTTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAACGAACAGTTCATTATTATGGGAATGGTCAAGAGTTTGCTTCA  299

seq1  TTTTTCACCGTAGTGTTACATGCCCATTTTTGTATGTAACAGACAGTAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACCGTAGTGTTACATGCCCATTTTTGTATGTAACAGACAGTAGG  349

seq1  GGGATTTAAGAAGGGGATTAGAGACAGAAGGTAGGTGGTCAAGTCCCGGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTAAGAAGGGGATTAGAGACAGAAGGTAGGTGGTCAAGTCCCGGG  399

seq1  ACCTTACTTCTACTCTCAAAAATGCATACTCCGAAGTTCTGTGATATAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTTCTACTCTCAAAAATGCATACTCCGAAGTTCTGTGATATAAC  449

seq1  AAGGCTGTCTTCAAGCCCCCGGGGTGATACCAATGATGTCACAAATCTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGTCTTCAAGCCCCCGGGGTGATACCAATGATGTCACAAATCTGC  499

seq1  CACTGTGGCACAGCAATGTGTGGTGGGAACATTCAGTTTTTGCAAATCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGCACAGCAATGTGTGGTGGGAACATTCAGTTTTTGCAAATCAC  549

seq1  CACATAACATCCTCATCCCATTATTAACCTTCTCTATTTTTCTGTTACAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAACATCCTCATCCCATTATTAACCTTCTCTATTTTTCTGTTACAC  599

seq1  ATTCCAGCCAAGGGCAGAAGAAGAAGGCAAGAATCAAGAGTTATCATGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCCAAGGGCAGAAGAAGAAGGCAAGAATCAAGAGTTATCATGTC  649

seq1  TCCAGGCAGTGATAAAACCATAGCCATAGTCTAAGGGTATAAACTATAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCAGTGATAAAACCATAGCCATAGTCTAAGGGTATAAACTATAAA  699

seq1  AGGTCAGAGGTAGAATTC  715
      ||||||||||||||||||
seq2  AGGTCAGAGGTAGAATTC  717

seq1: chrX_153779989_153781022
seq2: B6Ng01-015M15.g_71_1101

seq1  GAATTCTGGAATAAACCATTCTCCACACTAAATAATTGGCAATGGTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATAAACCATTCTCCACACTAAATAATTGGCAATGGTTCTG  50

seq1  TTAAAAAGAAATGAATATTTATTATATTGTAGGTCATACCTCATTTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAAATGAATATTTATTATATTGTAGGTCATACCTCATTTCCTG  100

seq1  AAAAAACACCTTTGGAAAACTGTTGGCAAGGCTAATAAAAGATCAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACCTTTGGAAAACTGTTGGCAAGGCTAATAAAAGATCAATGAA  150

seq1  CACCAGTGAAGTGGGCCTGAAGGTTCCAGCCCCTTCCCCAAACCTCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTGAAGTGGGCCTGAAGGTTCCAGCCCCTTCCCCAAACCTCCCAC  200

seq1  ATGTCTGGAAGAGGGAGTGCTTTCAAATGAGTGATGACATTTCCCATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGAAGAGGGAGTGCTTTCAAATGAGTGATGACATTTCCCATTTA  250

seq1  TGTGTATTATTAGTCTTCAGAAACCAAAACCAAAATATTAATACCAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTATTAGTCTTCAGAAACCAAAACCAAAATATTAATACCAACAG  300

seq1  TCTAAATCTCTGTTTTGCTTCTATAACCTCTAAGTATGTGAGCCCAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCTCTGTTTTGCTTCTATAACCTCTAAGTATGTGAGCCCAAGGA  350

seq1  AGTCACCTAAGTCTTCTTAATGATCTTTCCTTGTAGAACAATGAAGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTAAGTCTTCTTAATGATCTTTCCTTGTAGAACAATGAAGCTAT  400

seq1  TCCTTACTTCACAAGGTGATTGTGAGGTTAAAATAACAAAAGAATTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTTCACAAGGTGATTGTGAGGTTAAAATAACAAAAGAATTAAGA  450

seq1  GAGTGAACTCCTAACTCTCTGTTGACCTCTACGCATATAAAGAATCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAACTCCTAACTCTCTGTTGACCTCTACGCATATAAAGAATCTCAC  500

seq1  ACAGTTCTGTAATGCTTAGATACATATTTTCAAAACTCTGTTCTATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCTGTAATGCTTAGATACATATTTTCAAAACTCTGTTCTATTTTA  550

seq1  AGTGTTGCCCTTTTTTTTTTTTCCTATAAGGAAAAGAATCCCTGACCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGCCCTTTTTTTTTTTTCCTATAAGGAAAAGAATCCCTGACCTCG  600

seq1  GAAAGATGTATGGTCTGAGTTCATTTCTAACTCACCCATGATGATGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGTATGGTCTGAGTTCATTTCTAACTCACCCATGATGATGCATT  650

seq1  TTTAATGACCCATCCCCTCTTAGCTGTACCATTACCATGGTGATTAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGACCCATCCCCTCTTAGCTGTACCATTACCATGGTGATTAATGA  700

seq1  GAGACATTCCTAAGATGGCTCCTGGGTCATGCAGAAGGACAAGTAGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTCCTAAGATGGCTCCTGGGTCATGCAGAAGGACAAGTAGCAGT  750

seq1  GTGACATGGTGATGCTACCAAACCTACCAAGAACATTTCACACGCTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATGGTGATGCTACCAAACCTACCAAGAACATTTCACACGCTCATT  800

seq1  TGCATGATCTTCTGCCACTGTAGATATTCTGCTATGAGCAAAATCTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATCTTCTGCCACTGTAGATATTCTGCTATGAGCAAAATCTTGTT  850

seq1  TTGCACATGTATAATTATAGAGATGTTTGTTTTAATTTATATAAACATTC  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGCACATGTATAATTATAGAGATGTTTGTTTT-ATTTATATAAACATTC  899

seq1  AGATTACCATCTCAGGACCATTTTTGAGGCAAGTTCTTAGTATGTAGCCC  950
      |||||||||||||| |||  ||||||||||||||||||||||||||||||
seq2  AGATTACCATCTCA-GACATTTTTTGAGGCAAGTTCTTAGTATGTAGCCC  948

seq1  AGGCTGACCTTGAGCCCATGATCCTTATGCCTCTATTTCATAAGTTTGCC  1000
      |||||||||| |||||||||||||||||||||||| || |||||||||||
seq2  AGGCTGACCTGGAGCCCATGATCCTTATGCCTCTAATT-ATAAGTTTGCC  997

seq1  GGGATTACAAGCAT-GTGCCATCATGCTTGGAGTT  1034
      |||||  ||||||| ||||  || |||||||||||
seq2  GGGATATCAAGCATGGTGCGCTC-TGCTTGGAGTT  1031