BAC Information

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BAC

Clone NameB6Ng01-018F14
ChromosomeX (Build37)
Map Location 3,858,654 - 4,120,911
singlet/doubletdoublet
Overlap geneOTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057
Upstream geneLOC385516, LOC434721, LOC668957, LOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185
Downstream geneEG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018F14.bB6Ng01-018F14.g
ACCDH851776DH851777
length910104
definitionDH851776|Mus musculus domesticus DNA, BAC clone: B6Ng01-018F14, 5' end.DH851777|Mus musculus domesticus DNA, BAC clone: B6Ng01-018F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,858,654 - 3,859,266)(4,120,808 - 4,120,911)
sequence
gaattcatacacaacttactcttgtttctcagttgttgtttgttcaaagt
catatcttgagatcacagaaaataatttggttataagggaaatggtagaa
agaaaatttgggggggcgagagccacagagcctctgaggcggcgccattt
tcggctacagacaacctgccaccttcctggtcagagcacaggtgtccgca
cagcccgggaggcttctgcctcactttccgcgggggtcaccttggttctg
agaccccgcggccagcggtctgcgggtgagagtgtggaacacagaggcca
gcagcttctggaacgggcgagagccacagagcctctgaggcggcgccatt
tccggctccagacaaccagccaccttcctggtgagagcacaggggtccac
ccggcccgagagagaaatctggaaccatagatgagagcatcagcaacaga
atacaagaaatggaagagagaatctcaggtgcagaagattccatagagaa
cattggcacaacaatcaaagaaaatggaaaatgcaaaaagatcctaactc
aaaacatccaggaaatccaggacacaatgagaagaccgaacctacggata
ataggagtggatgagaatgaagattttcaactcaaaggaccagcaaacat
cttcaacaagattattgaagaaaacttcccaaatctaaagaaagagatac
ccatgaatatacaagaagcctactgaactccaaatagactggacagaaaa
gaaattcctcccgacacataataatcagaacaacaaatgcactaaataaa
gatagaatactaaagcattaagggaaatagctcaagtaacatataaaggc
aagcctatcagattacaccagatttttcaccagagactatgaaaggcatg
agagcctgga
atatattttgaatttacctgaagaagcatgaagtgtattatccaataatg
ttgactactatcctttaagacagtgaaaattcaggtgggagtgggtggga
gggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_3858654_3859266
seq2: B6Ng01-018F14.b_46_658

seq1  GAATTCATACACAACTTACTCTTGTTTCTCAGTTGTTGTTTGTTCAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACAACTTACTCTTGTTTCTCAGTTGTTGTTTGTTCAAAGT  50

seq1  CATATCTTGAGATCACAGAAAATAATTTGGTTATAAGGGAAATGGTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTGAGATCACAGAAAATAATTTGGTTATAAGGGAAATGGTAGAA  100

seq1  AGAAAATTTGGGGGGGCGAGAGCCACAGAGCCTCTGAGGCGGCGCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTGGGGGGGCGAGAGCCACAGAGCCTCTGAGGCGGCGCCATTT  150

seq1  TCGGCTACAGACAACCTGCCACCTTCCTGGTCAGAGCACAGGTGTCCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTACAGACAACCTGCCACCTTCCTGGTCAGAGCACAGGTGTCCGCA  200

seq1  CAGCCCGGGAGGCTTCTGCCTCACTTTCCGCGGGGGTCACCTTGGTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCGGGAGGCTTCTGCCTCACTTTCCGCGGGGGTCACCTTGGTTCTG  250

seq1  AGACCCCGCGGCCAGCGGTCTGCGGGTGAGAGTGTGGAACACAGAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCGCGGCCAGCGGTCTGCGGGTGAGAGTGTGGAACACAGAGGCCA  300

seq1  GCAGCTTCTGGAACGGGCGAGAGCCACAGAGCCTCTGAGGCGGCGCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTCTGGAACGGGCGAGAGCCACAGAGCCTCTGAGGCGGCGCCATT  350

seq1  TCCGGCTCCAGACAACCAGCCACCTTCCTGGTGAGAGCACAGGGGTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGCTCCAGACAACCAGCCACCTTCCTGGTGAGAGCACAGGGGTCCAC  400

seq1  CCGGCCCGAGAGAGAAATCTGGAACCATAGATGAGAGCATCAGCAACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCCGAGAGAGAAATCTGGAACCATAGATGAGAGCATCAGCAACAGA  450

seq1  ATACAAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAA  500

seq1  CATTGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAACTC  550

seq1  AAAACATCCAGGAAATCCAGGACACAATGAGAAGACCGAACCTACGGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATCCAGGAAATCCAGGACACAATGAGAAGACCGAACCTACGGATA  600

seq1  ATAGGAGTGGATG  613
      |||||||||||||
seq2  ATAGGAGTGGATG  613

seq1: chrX_4120808_4120911
seq2: B6Ng01-018F14.g_73_176 (reverse)

seq1  ATCCTCCCACCCACTCCCACCTGAATTTTCACTGTCTTAAAGGATAGTAC  50
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACCCTCCCACCCACTCCCACCTGAATTTTCACTGTCTTAAAGGATAGTAG  50

seq1  TCCACATTATAGGATAATATACTTCATGCTTCTTCAGGTAAATTCAAAAT  100
      || ||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  TCAACATTATTGGATAATACACTTCATGCTTCTTCAGGTAAATTCAAAAT  100

seq1  ATAT  104
      ||||
seq2  ATAT  104