BAC Information

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BAC

Clone NameB6Ng01-019O03
ChromosomeX (Build37)
Map Location 89,249,848 - 89,250,969
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670074, LOC667972, LOC667976, Mageb2, EG278167, EG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087
Downstream geneMageb1, EG236892, EG236893, Mageb18, EG436259, EG668061, EG546347, LOC629568
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019O03.bB6Ng01-019O03.g
ACCDH852838DH852839
length1,1731,112
definitionDH852838|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O03, 5' end.DH852839|Mus musculus domesticus DNA, BAC clone: B6Ng01-019O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tacacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagagaaacactcctccattgttggtg
gaattgcaggcttgtacaacgactctggtaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccaccaatacctctcctgggc
atatatccagaagatgccccaactggtaaaaggacacatgctccactatg
ttcatagcaaccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagagtaatggatacagaaaatgtggtacatttacataatgg
agtactactcagctattaaaaagaatgaatatatgaaattcctagccaaa
tgcatggacctggagggcatcatcctgtgaggtaacacattcacaaagga
actcacacaatatgtactcaatgataagtggatattagcccaaaacctag
gatacccaagatataagatacaatttgctaaacacatgaaactcaagaag
aatgaagactgaagtgtggacactatgcccctccttagaaatgggaacaa
aacacccatggaaggagttacagagacaagtttggagctgagatgaaagg
atggaccatgtagagactgccatatacagggatccaccccataatcagca
tccaaacgctgacaccattgcatacactagcaagattttattgaaaggac
ccagatgtagctgtctcttgtgagactatgccagggcctagcaaacacag
aagtggatgctcacagtcagctaatgaatggatcacagggctcccaatgg
aaggagctagagaaagtacccaagaagctaaagggatctgcaaccctata
agtggaacaacattatgactaaccagtaccccggagtcttggcttcagct
gctatgtatcaaaagaatggctagtttgccatacctggaaagaaggccca
ttggaaccaacctttatatcctcggtcaagggaccgcagggcaaaggtgg
gtggtgtggggtaggggatgtgt
gaattcccttgccttctttcctcatatctggaggtgctgtaagcaggact
cataatttgtcccacaaataattgtagtcttcttaagtgaaataacataa
tgtaggagtggggtgttcccaaatatggcaacaacaaaaactatttatat
gaaataaacaaaatttacttcaaaattaagtgttagtgagtctaaggcgt
ttccagcagtacttacttgtgtttcatcatggggcttgaatgtagccttg
gttctgaacacacaatatgcacactgtgtatattgccattacattgaaag
ttacatgagtgttagcactcgatatatagcaacataatatcaattttcat
caattttcatagatatatgaataaatcccatattatatttacattccatt
atttctttcagcaaataacaagacatataccatgactttcttagtttatg
caaggaatgtgggaaaaattaaatcataataaactagatatgccactcac
ggttttgctgatttaacacccagacattacatttccatttgttcttaaat
aataatagcaataataacaataataaaatgcagatcaagtcagtcaccac
gaagtatgtagagtgtttgtgtgatactttagtagatgagtagtgaaact
ctaggatataaatataaataagagatttaaaaataagtagtaagtagtgc
agaaatttctaaatgagctgtaggtaacctgaagccaggcatttttgaat
catttgggaattgcaatgtatttacaaaagagggtatatcatattaattg
acggtgacctacatgagactatgaacttgtgaacaaaaagactaaggtaa
ttattcattttggagttcagaaactaaaagctggacttgagtaatgatag
tatatgcttttaatctcagcactctggagtcagaggcaagcagatctctg
tgagttcgagttcagtgtgctctccagtgtgagttcaaggatggccagta
ctatgcaaagaatccttgtctagaaccctgccccccaccccctaaaaata
gctgtctggagaagtattaacatttgcttggatataagtaaacgaagtaa
cactggcatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_89249848_89250969
seq2: B6Ng01-019O03.g_67_1178 (reverse)

seq1  GAGATGCCAGTGGTTTACCCTCGTTTACTTATAATCCCCAAGCAAATGTT  50
      ||||||||||||  ||| | |||||||||||||    |||||||||||||
seq2  GAGATGCCAGTG--TTA-CTTCGTTTACTTATA---TCCAAGCAAATGTT  44

seq1  AATTACTTCTTCCAGACCAGCTTATTTTTTAGGGGGTGGGGGGCAGGGTT  100
      || |||||| |||||| |||||   |||||||||||||||||||||||||
seq2  AA-TACTTC-TCCAGA-CAGCT--ATTTTTAGGGGGTGGGGGGCAGGGTT  89

seq1  CTAGACAGGGATTCTTTGCATAGTACTGGCCATCCTGGAACTCACACTGG  150
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  CTAGACAAGGATTCTTTGCATAGTACTGGCCATCCTTGAACTCACACTGG  139

seq1  AGAGCACACTGAACTCGAACTCACAGAGATCTGCTTGCCTCTGACTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACACTGAACTCGAACTCACAGAGATCTGCTTGCCTCTGACTCCAG  189

seq1  AGTGCTGAGATTAAAAGCATATACTATCATTACTCAAGTCCAGCTTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGAGATTAAAAGCATATACTATCATTACTCAAGTCCAGCTTTTAG  239

seq1  TTTCTGAACTCCAAAATGAATAATTACCTTAGTCTTTTTGTTCACAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAACTCCAAAATGAATAATTACCTTAGTCTTTTTGTTCACAAGTT  289

seq1  CATAGTCTCATGTAGGTCACCGTCAATTAATATGATATACCCTCTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCTCATGTAGGTCACCGTCAATTAATATGATATACCCTCTTTTGT  339

seq1  AAATACATTGCAATTCCCAAATGATTC-AAAATGCCTGGCTTCAGGTTAC  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAATACATTGCAATTCCCAAATGATTCAAAAATGCCTGGCTTCAGGTTAC  389

seq1  CTACAGCTCATTTAGAAATTTCTGCACTACTTACTACTTATTTTTAAATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCTCATTTAGAAATTTCTGCACTACTTACTACTTATTTTTAAATC  439

seq1  TCTTATTTATATTTATATCCTAGAGTTTCACTACTCATCTACTAAAGTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTATATTTATATCCTAGAGTTTCACTACTCATCTACTAAAGTAT  489

seq1  CACACAAACACTCTACATACTTCGTGGTGACTGACTTGATCTGCATTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACACTCTACATACTTCGTGGTGACTGACTTGATCTGCATTTTA  539

seq1  TTATTGTTATTATTGCTATTATTATTTAAGAACAAATGGAAATGTAATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTATTATTGCTATTATTATTTAAGAACAAATGGAAATGTAATGT  589

seq1  CTGGGTGTTAAATCAGCAAAACCGTGAGTGGCATATCTAGTTTATTATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTTAAATCAGCAAAACCGTGAGTGGCATATCTAGTTTATTATGA  639

seq1  TTTAATTTTTCCCACATTCCTTGCATAAACTAAGAAAGTCATGGTATATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTCCCACATTCCTTGCATAAACTAAGAAAGTCATGGTATATG  689

seq1  TCTTGTTATTTGCTGAAAGAAATAATGGAATGTAAATATAATATGGGATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTATTTGCTGAAAGAAATAATGGAATGTAAATATAATATGGGATT  739

seq1  TATTCATATATCTATGAAAATTGATGAAAATTGATATTATGTTGCTATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATATCTATGAAAATTGATGAAAATTGATATTATGTTGCTATAT  789

seq1  ATCGAGTGCTAACACTCATGTAACTTTCAATGTAATGGCAATATACACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGTGCTAACACTCATGTAACTTTCAATGTAATGGCAATATACACAG  839

seq1  TGTGCATATTGTGTGTTCAGAACCAAGGCTACATTCAAGCCCCATGATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATTGTGTGTTCAGAACCAAGGCTACATTCAAGCCCCATGATGA  889

seq1  AACACAAGTAAGTACTGCTGGAAACGCCTTAGACTCACTAACACTTAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGTAAGTACTGCTGGAAACGCCTTAGACTCACTAACACTTAATT  939

seq1  TTGAAGTAAATTTTGTTTATTTCATATAAATAGTTTTTGTTGTTGCCATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAAATTTTGTTTATTTCATATAAATAGTTTTTGTTGTTGCCATA  989

seq1  TTTGGGAACACCCCACTCCTACATTATGTTATTTCACTTAAGAAGACTAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACACCCCACTCCTACATTATGTTATTTCACTTAAGAAGACTAC  1039

seq1  AATTATTTGTGGGACAAATTATGAGTCCTGCTTACAGCACCTCCAGATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTGTGGGACAAATTATGAGTCCTGCTTACAGCACCTCCAGATAT  1089

seq1  GAGGAAAGAAGGCAAGGGAATTC  1122
      |||||||||||||||||||||||
seq2  GAGGAAAGAAGGCAAGGGAATTC  1112