BAC Information

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BAC

Clone NameB6Ng01-020I24
ChromosomeX (Build37)
Map Location 72,339,669 - 72,340,205
singlet/doubletsinglet
Overlap genenone
Upstream geneOpn1mw, LOC627455, Gm1538, LOC628388, Tktl1, Flna, Emd, LOC100041344, Rpl10, Snora70, Dnase1l1, Taz, B230340J04Rik, Atp6ap1, Gdi1, D0HXS9928E, Plxna3, Lage3, Ubl4, Slc10a3, 1810037C20Rik, G6pdx, Ikbkg, EG628456, LOC628465, LOC100041484, LOC674920, EG245472, Olfr1326-ps1, Olfr1325, EG434797, LOC385383, EG667379, LOC667382, LOC546321, LOC667387, EG628518, Olfr1327-ps1, LOC628637, LOC667413, LOC100041594, LOC627775, EG546325, LOC100041017, EG628573, LOC100041642, LOC667437, EG667446, LOC669291, Gab3
Downstream geneDkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3, LOC635275, EG635295, LOC667537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020I24.bB6Ng01-020I24.g
ACCDH853327DH853328
length1,051530
definitionDH853327|Mus musculus domesticus DNA, BAC clone: B6Ng01-020I24, 5' end.DH853328|Mus musculus domesticus DNA, BAC clone: B6Ng01-020I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttgaaattttgatggggatagcattgaatctgtagattgctt
tcaggaggatagccattttgactatattaatcctgccaatcaatgagcat
gggaggtctttgcatcttctgagatcttcaatttctttcttcagagactt
gaaattcttatcatacagatctttcacttctttagttagggtcacaccaa
gatattttatattatttgtgactattggggagggtgttgtctccctaatt
tatttctcagcctgtttatcctttgtgtagagaaaggccattgatttgag
ttatatccagctacatcactgaagctgtttatcaggtttaggagttctct
ggtagaatttttagggtcacttatatatgctatcatatcatctgcaaata
gtgatattttgacttcttcctttccaatttgtatccccttgatctacttt
tgtcgtcgaattgctctggctaggacttcaagtactatattgaataggta
gggaaagagtggacagccttgtctagtccctgattttagtgggattgctt
ccagcttctctccatttagtttgatattggctactggtttgctgtatact
gctttaattatgtttaggtatgcaccttgaatttcagatctttccatgac
ttttatcatgaagaggtgttggattttggtatgtgatttttctctttgaa
tttgtttatatagaggattacattgatggatttctgtatcttaaaccatc
cctgcatctctgtgatgaagcctacttggacgtaatggatgatcattttg
atgtgttcttggattgaaatagcgagaattttattgcatatttttacatc
aatattcataaagggaaattggtctaaagttctctttctttgttggacct
ttgtgtggtttaggtatcagagtaattgtggcttcttagaatgaattggt
aaaggacattctgttttcattttttggattagtttgacgaagtatggaaa
ttatgcctccttcagggcctgtataaactacacttctaatcactctcgtc
g
attttgctaatagtggtaatgatcagaattgactattaacagataagacc
cttagaattaaatgttattttataatgctccagtgataattaatagggtg
agtaaatctgaagtactcatttgccatttgtccagtgccttcatctttgt
cctgtatctctatgctcaaatctttttggagagattttgctttcggagag
ttccagaacccgtggatttttcttcactcttacttctctaaccatcatta
taatgtctctatttctccagtagcttcctgaagtcccaactttttctact
ttccctagattgtcttaataagcagcctgaaagtatcattaaacttaggt
cctgtttatgcttaaaatactttttaagggttgatgataaggttcaacag
tgaagtgtgagtgagtgagtgagtgagtgagtgagtgagtgatggatgag
agcaaagaaagaaaagtttattcccctcatacagattttcttaagccaag
attaacctctgctttgccccatgacacaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_72339669_72340205
seq2: B6Ng01-020I24.g_68_603 (reverse)

seq1  ATTGTGTCCTGGGGCAAAGCAGAGGTTAACTCTTGGCTTAAGAAAATCTG  50
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  ATTGTGTCATGGGGCAAAGCAGAGGTTAA-TCTTGGCTTAAGAAAATCTG  49

seq1  TCTGAGGGGAATGAACTTTTCTTTCTTTGCTCTCATCCATCACTCACTCA  100
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGGAATAAACTTTTCTTTCTTTGCTCTCATCCATCACTCACTCA  99

seq1  CTCACTCACTCACTCACTCACTCACACTTCACTGTTGAACCTTATCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCACTCACTCACTCACTCACACTTCACTGTTGAACCTTATCATCA  149

seq1  ACCCTTAAAAAGTATTTTAAGCATAAACAGGACCTAAGTTTAATGATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAAAAAGTATTTTAAGCATAAACAGGACCTAAGTTTAATGATACT  199

seq1  TTCAGGCTGCTTATTAAGACAATCTAGGGAAAGTAGAAAAAGTTGGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTGCTTATTAAGACAATCTAGGGAAAGTAGAAAAAGTTGGGACT  249

seq1  TCAGGAAGCTACTGGAGAAATAGAGACATTATAATGATGGTTAGAGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGCTACTGGAGAAATAGAGACATTATAATGATGGTTAGAGAAGT  299

seq1  AAGAGTGAAGAAAAATCCACGGGTTCTGGAACTCTCCGAAAGCAAAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAAGAAAAATCCACGGGTTCTGGAACTCTCCGAAAGCAAAATCT  349

seq1  CTCCAAAAAGATTTGAGCATAGAGATACAGGACAAAGATGAAGGCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAAGATTTGAGCATAGAGATACAGGACAAAGATGAAGGCACTGG  399

seq1  ACAAATGGCAAATGAGTACTTCAGATTTACTCACCCTATTAATTATCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGCAAATGAGTACTTCAGATTTACTCACCCTATTAATTATCACT  449

seq1  GGAGCATTATAAAATAACATTTAATTCTAAGGGTCTTATCTGTTAATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTATAAAATAACATTTAATTCTAAGGGTCTTATCTGTTAATAGT  499

seq1  CAATTCTGATCATTACCACTATTAGCAAAATGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGATCATTACCACTATTAGCAAAATGAATTC  536