BAC Information

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BAC

Clone NameB6Ng01-021G01
ChromosomeX (Build37)
Map Location 73,353,726 - 73,488,866
singlet/doubletdoublet
Overlap geneLOC385472
Upstream geneDkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3, LOC635275, EG635295, LOC667537
Downstream geneLOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021G01.bB6Ng01-021G01.g
ACCDH853899DH853900
length4371,092
definitionDH853899|Mus musculus domesticus DNA, BAC clone: B6Ng01-021G01, 5' end.DH853900|Mus musculus domesticus DNA, BAC clone: B6Ng01-021G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,488,430 - 73,488,866)(73,353,726 - 73,354,825)
sequence
gaattctttggaaattcaacaagaatttccaagatagcctttctcacatg
cacactaatgattaactgtggatgcagattgctcacaaaatttttgtccc
caatggtttccctgaattactcctttacttactatgtgtatagtacaagg
cctaggtcttatcttgcagttcctgtaagagtgaaagatagcagtgagca
tatgaatatgtctttctgtagagggccgtatagtattgggaatgtgaatg
tgtgtttctgtacagtccagaatggcaatgggaaagttgatgtgtgtttt
gttaagaacagtatgtatcaaaagatggcctagtcggccaccactggaaa
gagaggcccattggacttgcaaactttatatgccccagtacaggggaaca
ccagggccaaaaagggggagtaggggagttggggagt
gaattcaaaatataaaattttaaataagtaaggacagataactgccagag
tttccctagtttgcttttttttcagcttgtgattggggaatccagccttc
ccagtttccattccttttatttttaattttttttattgcttattttattt
acatttcaaatgttaccccttcccagttacccctctgaaaaccccctagc
cactttcaagtccatggcatttattctgtgttttgcttgctgagaatccc
tctcatgccctcaaacaacttccagtacctatcttcaagtgctcctcata
cccacttaatcttgtaaattcctcagtgcctttcccaggtataagtctat
gtagaagaaatgagagatggatgagaagccaagtgacacatgcttgtgat
ttccagacactggagactgaggcaagaggacagtaatttcaaggccagcc
tggactatatagcaagactctgtcactttaaaaaaagagagagaaagaaa
tggaagagaaacagataaaaagtattttcaacttacttctaaatatttaa
gttttcttagacttatattttcataaattattcctaaaataaatgccaac
tttacagctaagacatatgcacttagttggagccaacagaccattgccat
agatttttttctggaaaaaaaaggaaatttaattttgaaattaaatcatt
tatatggtatcaatgttccaaatgctgactggctgagttatagtatctat
aaagtactttccagctctagagtccctgatattaatgtagaatatgaaat
atggacttggccaagataaatttaaagtgccaaaagatccaacaagggcc
tatgaaaagggtcatggtgtgtggtctgtcacttttggtgacacaatgtg
caggcagggagcgagggacaacaggcctccaatgtatatgcacttggtgc
agttttcatttcttgctctgtttttcagacaggaggagaccttctgagta
gcttcactgatgtccagtgtgggtacattgcctgctcaatgtatggacat
ttcagtcaagacaatgttacaattgccatgcgaagcacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_73488430_73488866
seq2: B6Ng01-021G01.b_43_479 (reverse)

seq1  ACTCCCCAACTCCCCTACTCCCCCTTTTTGGCCCTGGTGTTCCCCTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCAACTCCCCTACTCCCCCTTTTTGGCCCTGGTGTTCCCCTGTAC  50

seq1  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGGTGG  100

seq1  CCGACTAGGCCATCTTTTGATACATACTGTTCTTAACAAAACACACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTAGGCCATCTTTTGATACATACTGTTCTTAACAAAACACACATCA  150

seq1  ACTTTCCCATTGCCATTCTGGACTGTACAGAAACACACATTCACATTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCATTGCCATTCTGGACTGTACAGAAACACACATTCACATTCCC  200

seq1  AATACTATACGGCCCTCTACAGAAAGACATATTCATATGCTCACTGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATACGGCCCTCTACAGAAAGACATATTCATATGCTCACTGCTAT  250

seq1  CTTTCACTCTTACAGGAACTGCAAGATAAGACCTAGGCCTTGTACTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTCTTACAGGAACTGCAAGATAAGACCTAGGCCTTGTACTATAC  300

seq1  ACATAGTAAGTAAAGGAGTAATTCAGGGAAACCATTGGGGACAAAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTAAGTAAAGGAGTAATTCAGGGAAACCATTGGGGACAAAAATTT  350

seq1  TGTGAGCAATCTGCATCCACAGTTAATCATTAGTGTGCATGTGAGAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCAATCTGCATCCACAGTTAATCATTAGTGTGCATGTGAGAAAGG  400

seq1  CTATCTTGGAAATTCTTGTTGAATTTCCAAAGAATTC  437
      |||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGGAAATTCTTGTTGAATTTCCAAAGAATTC  437

seq1: chrX_73353726_73354825
seq2: B6Ng01-021G01.g_66_1157

seq1  GAATTCAAAATATAAAATTTTAAATAAGTAAGGACAGATAACTGCCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATAAAATTTTAAATAAGTAAGGACAGATAACTGCCAGAG  50

seq1  TTTCCCTAGTTTGCTTTTTTTTCAGCTTGTGATTGGGGAATCCAGCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTAGTTTGCTTTTTTTTCAGCTTGTGATTGGGGAATCCAGCCTTC  100

seq1  CCAGTTTCCATTCCTTTTATTTTTAATTTTTTTTATTGCTTATTTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCCATTCCTTTTATTTTTAATTTTTTTTATTGCTTATTTTATTT  150

seq1  ACATTTCAAATGTTACCCCTTCCCAGTTACCCCTCTGAAAACCCCCTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAAATGTTACCCCTTCCCAGTTACCCCTCTGAAAACCCCCTAGC  200

seq1  CACTTTCAAGTCCATGGCATTTATTCTGTGTTTTGCTTGCTGAGAATCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCAAGTCCATGGCATTTATTCTGTGTTTTGCTTGCTGAGAATCCC  250

seq1  TCTCATGCCCTCAAACAACTTCCAGTACCTATCTTCAAGTGCTCCTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCCCTCAAACAACTTCCAGTACCTATCTTCAAGTGCTCCTCATA  300

seq1  CCCACTTAATCTTGTAAATTCCTCAGTGCCTTTCCCAGGTATAAGTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTAATCTTGTAAATTCCTCAGTGCCTTTCCCAGGTATAAGTCTAT  350

seq1  GTAGAAGAAATGAGAGATGGATGAGAAGCCAAGTGACACATGCTTGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGAAATGAGAGATGGATGAGAAGCCAAGTGACACATGCTTGTGAT  400

seq1  TTCCAGACACTGGAGACTGAGGCAAGAGGACAGTAATTTCAAGGCCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACACTGGAGACTGAGGCAAGAGGACAGTAATTTCAAGGCCAGCC  450

seq1  TGGACTATATAGCAAGACTCTGTCACTTTAAAAAAAGAGAGAGAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATATAGCAAGACTCTGTCACTTTAAAAAAAGAGAGAGAAAGAAA  500

seq1  TGGAAGAGAAACAGATAAAAAGTATTTTCAACTTACTTCTAAATATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGAAACAGATAAAAAGTATTTTCAACTTACTTCTAAATATTTAA  550

seq1  GTTTTCTTAGACTTATATTTTCATAAATTATTCCTAAAATAAATGCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTAGACTTATATTTTCATAAATTATTCCTAAAATAAATGCCAAC  600

seq1  TTTACAGCTAAGACATATGCACTTAGTTGGAGCCAACAGACCATTGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGCTAAGACATATGCACTTAGTTGGAGCCAACAGACCATTGCCAT  650

seq1  AGATTTTTTTCTGGAAAAAAAAGGAAATTTAATTTTGAAATTAAATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTCTGGAAAAAAAAGGAAATTTAATTTTGAAATTAAATCATT  700

seq1  TATATGGTATCAATGTTCCAAATGCTGACTGGCTGAGTTATAGTATCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGTATCAATGTTCCAAATGCTGACTGGCTGAGTTATAGTATCTAT  750

seq1  AAAGTACTTTCCAGCTCTAAGAGTCCCTGATATTAATGTAGAATATGAAA  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAGTACTTTCCAGCTCT-AGAGTCCCTGATATTAATGTAGAATATGAAA  799

seq1  TATGGACTTGGCCAAGATAAATTTAAAGTGCCAAAAGATCCAACAAGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACTTGGCCAAGATAAATTTAAAGTGCCAAAAGATCCAACAAGGGC  849

seq1  CTATGAAAAGGGTCATGGTGTGTGGTCTGTCAC-TTTGGTGACACAATGT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTATGAAAAGGGTCATGGTGTGTGGTCTGTCACTTTTGGTGACACAATGT  899

seq1  GCAGGCAGGGAGCGAGGGACACCAGGCCTCCA---TGTATGCACAT-GTG  945
      ||||||||||||||||||||| ||||||||||   | ||||||| | |||
seq2  GCAGGCAGGGAGCGAGGGACAACAGGCCTCCAATGTATATGCACTTGGTG  949

seq1  CAGTTTTCAATTTCTTGCTCTGTTTTCCAGACAGGAGGAGACCTCTTGAG  995
      |||||||| ||||||||||||||||| |||||||||||||||||  ||||
seq2  CAGTTTTC-ATTTCTTGCTCTGTTTTTCAGACAGGAGGAGACCTTCTGAG  998

seq1  TTAGGCTTCCACTGATGTCCAGTGTGGGTACATTGCCTGCCTTCAATGTA  1045
      |   |||| |||||||||||||||||||||||||||||||  ||||||||
seq2  T--AGCTT-CACTGATGTCCAGTGTGGGTACATTGCCTGC--TCAATGTA  1043

seq1  TGGACATTTCAGTCAAAGAACAAAGTGTTCACATACTGTCATGCGAAGCA  1095
      ||||||||||||||||   ||||  |||| ||| | || |||||||||||
seq2  TGGACATTTCAGTCAA--GACAA--TGTT-ACA-ATTGCCATGCGAAGCA  1087

seq1  CAAAA  1100
      |||||
seq2  CAAAA  1092