BAC Information

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BAC

Clone NameB6Ng01-021N24
ChromosomeX (Build37)
Map Location 151,271,462 - 151,271,865
singlet/doubletsinglet
Overlap genenone
Upstream gene4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076, 4930524N10Rik, EG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331, LOC100040925
Downstream geneLOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4, LOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021N24.bB6Ng01-021N24.g
ACCDH854262DH854263
length680398
definitionDH854262|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N24, 5' end.DH854263|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggatgtctttaatttctttctttatttccttcctgacaaaat
tatcattgagtagagaattgtttagtttacatgggtatgtgggcattctg
gtttgttctttttgtttgtttgttcgtttttttgttgttgttttgttttt
tgttattgaagtctagcctttgtctatggtggtctgatataatgcatggg
attatttcaatcttcttgtatctggtgaggcttgttttgtgactgtttat
atggtcatttttggagaaggtaccatgagatgcagagaggaagttatatt
tgatgaaatattatgtatgtatcagttaaatcaatttggttcataacctc
aattagtctttgtgtctctgtttagtttctgtttcaatgacctgttactt
ggtaagagtggagtattgaagtctcctagtattattgtgtgtttcaatgt
gtgttttgagctttaataaagtttgttttatgaatgtgggtgcccttcca
tttggggcatagatgtttagaattgagactttttgcttggtagatttttc
ctgttgtgaatatgaagtgtccttccccatcttttttttcataacttttt
agttgaacatctattttattgactattagagtagaatcccatcttgtgtt
ctcgggactatttgcctggaagactttttt
tttatttagctctgtaccccatttttaaataggcttatttgattttctgt
agttcagcttcttgagttctttttatatattggacattagtcccctatct
gatttagaattggtaaagatcataatttattaacatagattttaagcacc
accactaagtaattattgaaatgaacagaattattgaggaaataataaga
caaacctatatatttggatatgggcttgtctaagaagaatcttaattaag
ccttaggattagtatttatatcctaaaatatatcctggctctttaactct
taactcataactcagagagtgcttaataataaactcctcctagccttttt
gattaaataatattatagagtggatcaggaggtgtttgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151271462_151271865
seq2: B6Ng01-021N24.g_68_471 (reverse)

seq1  CACACACACACAAACACCTCCTGATCCACTCTATAATATTATTTAATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAAACACCTCCTGATCCACTCTATAATATTATTTAATCAA  50

seq1  AAAGGCTAGGAGGAGTTTATTATTAAGCACTCTCTGAGTTATGAGTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTAGGAGGAGTTTATTATTAAGCACTCTCTGAGTTATGAGTTAAG  100

seq1  AGTTAAAGAGCCAGGATATATTTTAGGATATAAATACTAATCCTAAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGAGCCAGGATATATTTTAGGATATAAATACTAATCCTAAGGCT  150

seq1  TAATTAAGATTCTTCTTAGACAAGCCCATATCCAAATATATAGGTTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGATTCTTCTTAGACAAGCCCATATCCAAATATATAGGTTTGTC  200

seq1  TTATTATTTCCTCAATAATTCTGTTCATTTCAATAATTACTTAGTGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTCCTCAATAATTCTGTTCATTTCAATAATTACTTAGTGGTGG  250

seq1  TGCTTAAAATCTATGTTAATAAATTATGATCTTTACCAATTCTAAATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAAATCTATGTTAATAAATTATGATCTTTACCAATTCTAAATCAG  300

seq1  ATAGGGGACTAATGTCCAATATATAAAAAGAACTCAAGAAGCTGAACTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGACTAATGTCCAATATATAAAAAGAACTCAAGAAGCTGAACTAC  350

seq1  AGAAAATCAAATAAGCCTATTTAAAAATGGGGTACAGAGCTAAATAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCAAATAAGCCTATTTAAAAATGGGGTACAGAGCTAAATAAAGA  400

seq1  ATTC  404
      ||||
seq2  ATTC  404